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The map label for this gene is lyrA [H]

Identifier: 57650877

GI number: 57650877

Start: 2390766

End: 2392025

Strand: Direct

Name: lyrA [H]

Synonym: SACOL2328

Alternate gene names: 57650877

Gene position: 2390766-2392025 (Clockwise)

Preceding gene: 57650875

Following gene: 57650879

Centisome position: 85.1

GC content: 33.33

Gene sequence:

>1260_bases
ATGAAGAACAATAAAATTTCTGGTTTTCAATGGGCAATGACGATTTTCGTCTTCTTTGTCATTACAATGGCGTTATCCAT
TATGCTCAGAGATTTCCAGTCTATAATTGGTGTCAAACACTTTATATTTGAAGTTACAGATCTAGCACCATTAATTGCTG
CAATCATTTGTATACTCGTTTTCAAATATAAAAAGGTCCAACTTGCAGGTTTAAAATTCTCAATCAGCCTGAAAGTAATT
GAACGTCTATTGCTAGCTTTAATTTTACCTTTAATTATTCTAATTATTGGTATGTACAGCTTTAATACATTTGCAGATAG
CTTTATTTTATTACAATCAACAGGCTTATCAGTACCTATTACACACATTCTGATTGGACATATTCTGATGGCGTTCGTAG
TAGAATTCGGATTCCGTTCATACTTACAAAATATTGTTGAAACGAAAATGAACACGTTCTTTGCAAGTATTGTTGTTGGT
TTGATGTATTCAGTTTTCTCAGCAAATACAACTTATGGTACAGAATTTGCTGCTTATAACTTCCTTTATACATTCTCATT
CTCTATGATTCTTGGTGAATTAATTAGAGCGACTAAAGGACGTACAATTTATATTGCAACGACATTCCATGCTTCAATGA
CATTCGGACTTATTTTCTTGTTTAGCGAAGAAATCGGCGATCTATTTTCAATCAAAGTCATCGCCATTTCAACAGCAATC
GTTGCAGTAGGATACATTGGTTTAAGCTTAATTATCCGAGGTATTGCATATTTAACAACAAGACGAAACCTTGAAGAACT
TGAGCCTAATAATTATTTAGACCATGTCAATGACGATGAAGAAACTAATCATACTGAGGCTGAAAAATCTTCTTCAAATA
TTAAAGATGCTGAAAAAACAGGTGTAGCTACTGCATCAACGGTTGGTGTTGCTAAAAATGATACTGAAAATACAGTGGCT
GACGAACCAAGCATTCATGAAGGTACTGAAAAAACAGAACCTCAACATCACATAGGTAATCAAACTGAATCTAATCATGA
TGAAGATCATGACATCACTTCGGAGTCAGTAGAATCAGCAGAATCAGTTAAACAAGCACCACAAAGTGACGATTTAACAA
ACGATTCAAATGAAGATGAAATAGAGCAATCATTAAAAGAACCTGTGACTTATAAAGAAGACAGACGTTCATCAGTTGTA
ATTGATGCAGAAAAACATATCGAAAAAACTGAAGAACAATCTTCAGATAAAAACAAATAA

Upstream 100 bases:

>100_bases
TTTCATTAATATTGACATAGACAATTTATCTCTCGGCTTGTAATATGTATAATTGTTACTAAAAGATATTTTGCTTGTTA
CCTAATGGAGGTTACATATA

Downstream 100 bases:

>100_bases
TAACAAAGCGCTTGCTAGTACCTCTTAAAAAGATGATGCTAGCAAGCGCTTTTCTATACTATATATTATTTTTCTAAAAT
TTTAACACCCTCTTGAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKNNKISGFQWAMTIFVFFVITMALSIMLRDFQSIIGVKHFIFEVTDLAPLIAAIICILVFKYKKVQLAGLKFSISLKVI
ERLLLALILPLIILIIGMYSFNTFADSFILLQSTGLSVPITHILIGHILMAFVVEFGFRSYLQNIVETKMNTFFASIVVG
LMYSVFSANTTYGTEFAAYNFLYTFSFSMILGELIRATKGRTIYIATTFHASMTFGLIFLFSEEIGDLFSIKVIAISTAI
VAVGYIGLSLIIRGIAYLTTRRNLEELEPNNYLDHVNDDEETNHTEAEKSSSNIKDAEKTGVATASTVGVAKNDTENTVA
DEPSIHEGTEKTEPQHHIGNQTESNHDEDHDITSESVESAESVKQAPQSDDLTNDSNEDEIEQSLKEPVTYKEDRRSSVV
IDAEKHIEKTEEQSSDKNK

Sequences:

>Translated_419_residues
MKNNKISGFQWAMTIFVFFVITMALSIMLRDFQSIIGVKHFIFEVTDLAPLIAAIICILVFKYKKVQLAGLKFSISLKVI
ERLLLALILPLIILIIGMYSFNTFADSFILLQSTGLSVPITHILIGHILMAFVVEFGFRSYLQNIVETKMNTFFASIVVG
LMYSVFSANTTYGTEFAAYNFLYTFSFSMILGELIRATKGRTIYIATTFHASMTFGLIFLFSEEIGDLFSIKVIAISTAI
VAVGYIGLSLIIRGIAYLTTRRNLEELEPNNYLDHVNDDEETNHTEAEKSSSNIKDAEKTGVATASTVGVAKNDTENTVA
DEPSIHEGTEKTEPQHHIGNQTESNHDEDHDITSESVESAESVKQAPQSDDLTNDSNEDEIEQSLKEPVTYKEDRRSSVV
IDAEKHIEKTEEQSSDKNK
>Mature_419_residues
MKNNKISGFQWAMTIFVFFVITMALSIMLRDFQSIIGVKHFIFEVTDLAPLIAAIICILVFKYKKVQLAGLKFSISLKVI
ERLLLALILPLIILIIGMYSFNTFADSFILLQSTGLSVPITHILIGHILMAFVVEFGFRSYLQNIVETKMNTFFASIVVG
LMYSVFSANTTYGTEFAAYNFLYTFSFSMILGELIRATKGRTIYIATTFHASMTFGLIFLFSEEIGDLFSIKVIAISTAI
VAVGYIGLSLIIRGIAYLTTRRNLEELEPNNYLDHVNDDEETNHTEAEKSSSNIKDAEKTGVATASTVGVAKNDTENTVA
DEPSIHEGTEKTEPQHHIGNQTESNHDEDHDITSESVESAESVKQAPQSDDLTNDSNEDEIEQSLKEPVTYKEDRRSSVV
IDAEKHIEKTEEQSSDKNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lyrA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003675 [H]

Pfam domain/function: PF02517 Abi [H]

EC number: NA

Molecular weight: Translated: 46814; Mature: 46814

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNKISGFQWAMTIFVFFVITMALSIMLRDFQSIIGVKHFIFEVTDLAPLIAAIICILV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKYKKVQLAGLKFSISLKVIERLLLALILPLIILIIGMYSFNTFADSFILLQSTGLSVPI
HHHHHEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH
THILIGHILMAFVVEFGFRSYLQNIVETKMNTFFASIVVGLMYSVFSANTTYGTEFAAYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FLYTFSFSMILGELIRATKGRTIYIATTFHASMTFGLIFLFSEEIGDLFSIKVIAISTAI
HHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VAVGYIGLSLIIRGIAYLTTRRNLEELEPNNYLDHVNDDEETNHTEAEKSSSNIKDAEKT
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHH
GVATASTVGVAKNDTENTVADEPSIHEGTEKTEPQHHIGNQTESNHDEDHDITSESVESA
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHH
ESVKQAPQSDDLTNDSNEDEIEQSLKEPVTYKEDRRSSVVIDAEKHIEKTEEQSSDKNK
HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKNNKISGFQWAMTIFVFFVITMALSIMLRDFQSIIGVKHFIFEVTDLAPLIAAIICILV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKYKKVQLAGLKFSISLKVIERLLLALILPLIILIIGMYSFNTFADSFILLQSTGLSVPI
HHHHHEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH
THILIGHILMAFVVEFGFRSYLQNIVETKMNTFFASIVVGLMYSVFSANTTYGTEFAAYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
FLYTFSFSMILGELIRATKGRTIYIATTFHASMTFGLIFLFSEEIGDLFSIKVIAISTAI
HHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VAVGYIGLSLIIRGIAYLTTRRNLEELEPNNYLDHVNDDEETNHTEAEKSSSNIKDAEKT
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHH
GVATASTVGVAKNDTENTVADEPSIHEGTEKTEPQHHIGNQTESNHDEDHDITSESVESA
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHH
ESVKQAPQSDDLTNDSNEDEIEQSLKEPVTYKEDRRSSVVIDAEKHIEKTEEQSSDKNK
HHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA