Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
---|---|
Accession | NC_002951 |
Length | 2,809,422 |
Click here to switch to the map view.
The map label for this gene is map
Identifier: 57650691
GI number: 57650691
Start: 2061282
End: 2061587
Strand: Direct
Name: map
Synonym: SACOL2002
Alternate gene names: NA
Gene position: 2061282-2061587 (Clockwise)
Preceding gene: 57650690
Following gene: 57650692
Centisome position: 73.37
GC content: 26.14
Gene sequence:
>2056_bases ATGAAATTTAAGTCATTGATTACAACAACTTTAGCATTAGGTGTTTTAGCATCAACAGGTGCAAACTTTAATAATAATGA AGCGTCTGCCGCAGCTAAGCCATTAGATAAATCATCAAGTTCGTTACACCATGGATATTCTAAAGTCCATGTTCCATATG CAATCACTGTGAACGGTACAAGCCAAAATATTTTATCAAGCTTAACATTTAATAAGAATCAAAATATTAGTTATAAAGAT TTAGAGGATAGAGTTAAATCAGTTTTAAAATCAGACAGAGGTATTAGTGATATAGATTTAAGACTATCGAAGCAAGCGAA ATATACTGTTTACTTTAAAAATGGAACAAAGAAAGTTATCGATTTGAAAGCAGGTATTTACACAGCTGATTTAATTAATA CAAGTGAAATTAAAGCTATTAATATTAACGTAGATACTAAAAAGCAAGTTGAAGATAAAAAGAAAGATAAAGCAAATTAC CAAGTTCCATACACAATCACTGTGAACGGTACAAGCCAAAATATTTTATCAAACTTAACATTTAATAAGAATCAAAATAT TAGTTACAAAGATTTAGAGGATAAAGTTAAATCAGTTTTAGAATCAAATAGAGGTATTACCGATGTTGATTTAAGATTAT CGAAGCAAGCGAAATATACAGTTAATTTTAAAAATGGAACGAAGAAAGTTATCGATTTGAAATCAGGTATTTACACAGCG AATTTAATAAATTCAAGTGATATTAAAAGTATCAATATTAACGTAGATACAAAAAAACATATCGAAAATAAAGCTAAAAG AAACTATCAAGTTCCATATTCAATTAATTTAAATGGTACATCTACAAACATTTTATCGAATCTTTCATTTTCAAATAAAC CTTGGACAAATTACAAAAATTTAACTAGTCAAATAAAATCAGTACTGAAGCATGATAGAGGTATTAGTGAACAAGATTTA AAATATGCTAAGAAAGCTTATTATACTGTTTATTTTAAAAATGGTGGTAAAAGAATCTTACAGTTGAATTCAAAAAATTA CACAGCAAACTTAGTTCATGCGAAAGATGTTAAGAGAATTGAAATTACTGTTAAAACAGGAACTAAAGCGAAAGCAGACA GATATGTACCATACACAATTGCAGTAAATGGCACATCAACACCAATTTTATCAGATTTAAAATTTACAGGTGACCCACGT GTAGGCTACAAAGATATCTCTAAAAAAGTTAAATCAGTATTGAAGCATGATAGAGGTATCGGGGAACGTGAATTAAAATA TGCAAAAAAAGCAACTTACACAGTACATTTTAAAAATGGAACGAAAAAAGTGATTAACATAAATTCAAATATTAGCCAAC TGAATCTGCTTTATGTTCAAGATATTAAAAAGATAGATATTGATGTTAAAACAGGAACTAAAGCGAAAGCGGATAGCTAT GTACCATATACAATTGCAGTAAATGGCACATCAACACCAATTTTATCAAAACTTAAAATTTCGAATAAACAATTAATTAG TTACAAATATTTAAATGACAAAGTGAAATCTGTATTAAAAAGTGAAAGAGGCATCAGTGATCTTGACTTAAAATTTGCGA AACAAGCAAAATATACAGTATATTTCAAAAATGGAAAGAAACAAGTAGTGAATTTAAAATCAGACATCTTTACACCTAAT TTATTTAGTGCCAAAGATATTAAAAAGATTGATATTGATGTAAAACAATACACTAAATCAAAAAAAAATAAATAAATCTA ATAATGTGAAATTCCCAGTAACAATAAATAAATTTGAAAACATAGTTTCAAATGAATTTGTGTTCTATAATGCAAGCAAA ATTACAATTAATGATTTAAGTATAAAACTTAAATCAGCAATGGCAAATGATCAAGGGATAACTAAACATGACATAGGACT TGCTGAACGCGCAGTGTATAAAGTGTATTTTAAAAATGGTTCGTCAAAATATGTAGACTTAAAAACTGAGTATAAAGATG AAAGAGTATTTAAAGCAACTGACATTAAAAAGGTAGATATTGAACTTAAATTCTAA
Upstream 100 bases:
>100_bases AGATAATTTATTATTAATATTCAGTTAATTCAAAAAATAGAGAAAGTCTGGCTATAATTAAGTTGCAAATACGAATTACA CAAAAAAGGAGAGATAATTT
Downstream 100 bases:
>100_bases TCTTTAATTTTATAATAAGGCATCTCACAATCGTGGGGTGCCTTTTACATTTGTAGAGATGTGATGCTTGAATGTTTGAA GTGATTTGCCAAAAGTTATA
Product: map protein, programmed frameshift
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>684_residues MKFKSLITTTLALGVLASTGANFNNNEASAAAKPLDKSSSSLHHGYSKVHVPYAITVNGTSQNILSSLTFNKNQNISYKD LEDRVKSVLKSDRGISDIDLRLSKQAKYTVYFKNGTKKVIDLKAGIYTADLINTSEIKAININVDTKKQVEDKKKDKANY QVPYTITVNGTSQNILSNLTFNKNQNISYKDLEDKVKSVLESNRGITDVDLRLSKQAKYTVNFKNGTKKVIDLKSGIYTA NLINSSDIKSININVDTKKHIENKAKRNYQVPYSINLNGTSTNILSNLSFSNKPWTNYKNLTSQIKSVLKHDRGISEQDL KYAKKAYYTVYFKNGGKRILQLNSKNYTANLVHAKDVKRIEITVKTGTKAKADRYVPYTIAVNGTSTPILSDLKFTGDPR VGYKDISKKVKSVLKHDRGIGERELKYAKKATYTVHFKNGTKKVININSNISQLNLLYVQDIKKIDIDVKTGTKAKADSY VPYTIAVNGTSTPILSKLKISNKQLISYKYLNDKVKSVLKSERGISDLDLKFAKQAKYTVYFKNGKKQVVNLKSDIFTPN LFSAKDIKKIDIDVKQYTKSKKNNKSNNVKFPVTINKFENIVSNEFVFYNASKITINDLSIKLKSAMANDQGITKHDIGL AERAVYKVYFKNGSSKYVDLKTEYKDERVFKATDIKKVDIELKF
Sequences:
>Translated_102_residues LEFKFNIYLFNVSCFKYSFIFILSF*VYIF*RTIFKIHFIHCAFSKSYVMFSYPLIICHC*FKFYT*IINCNFACIIEHK FI*NYVFKFIYCYWEFHIIRFI >Mature_102_residues LEFKFNIYLFNVSCFKYSFIFILSF*VYIF*RTIFKIHFIHCAFSKSYVMFSYPLIICHC*FKFYT*IINCNFACIIEHK FI*NYVFKFIYCYWEFHIIRFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12083; Mature: 12083
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LEFKFNIYLFNVSCFKYSFIFILSFVYIFRTIFKIHFIHCAFSKSYVMFSYPLIICHCFK CCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH FYTIINCNFACIIEHKFINYVFKFIYCYWEFHIIRFI HHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA