Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is nrdR [H]
Identifier: 57650557
GI number: 57650557
Start: 1764387
End: 1764857
Strand: Reverse
Name: nrdR [H]
Synonym: SACOL1733
Alternate gene names: 57650557
Gene position: 1764857-1764387 (Counterclockwise)
Preceding gene: 57650558
Following gene: 57650556
Centisome position: 62.82
GC content: 35.67
Gene sequence:
>471_bases ATGAAATGCCCGAAATGTAATTCTACACAATCTAAAGTTGTAGATTCAAGGCATGCCGATGAATTAAATGCCATTCGAAG ACGAAGAGAATGTGAAAATTGTGGAACACGTTTCACTACATTTGAACATATCGAAGTTAGTCAGCTTATAGTTGTGAAAA AAGATGGCACAAGAGAGCAGTTTTCAAGAGAAAAGATACTTAATGGACTTGTGCGTTCTTGTGAGAAACGACCAGTTAGA TATCAACAACTTGAAGACATAACTAACAAGGTTGAATGGCAATTACGAGATGAAGGTCATACGGAAGTGTCTTCACGAGA TATAGGTGAACACGTTATGAACTTGTTAATGCATGTTGATCAAGTTTCATATGTTAGATTTGCATCAGTCTATAAAGAAT TTAAAGATGTTGATCAATTGTTAGCATCGATGCAAGGGATTTTAAGCGAAAACAAACGGAGTGATGCTTAA
Upstream 100 bases:
>100_bases TGTTTCATTATTTGGTTAAATGAATTAAATTGAGGGATTCTTTTTTCATCTCTAGATTTATAGTATAATTAGGCATAATC AAAATAAAGAGGGTGATGTA
Downstream 100 bases:
>100_bases ATGGGACGACAAGCCTTCGAATTCGGCTTAAGACCAAAGGATCAATTCAAAGTTATGCAACACTTTGATTTAAATACGAA TCATTTAGAGGTATTGAATC
Product: transcriptional regulator NrdR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQFSREKILNGLVRSCEKRPVR YQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA
Sequences:
>Translated_156_residues MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQFSREKILNGLVRSCEKRPVR YQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA >Mature_156_residues MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQFSREKILNGLVRSCEKRPVR YQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA
Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]
COG id: COG1327
COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-cone domain [H]
Homologues:
Organism=Escherichia coli, GI1786615, Length=140, Percent_Identity=45, Blast_Score=127, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005144 - InterPro: IPR003796 [H]
Pfam domain/function: PF03477 ATP-cone [H]
EC number: NA
Molecular weight: Translated: 18204; Mature: 18204
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS51161 ATP_CONE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCHHH FSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH QVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCHHH FSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH QVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA