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The map label for this gene is nusB

Identifier: 57650481

GI number: 57650481

Start: 1605121

End: 1605510

Strand: Reverse

Name: nusB

Synonym: SACOL1569

Alternate gene names: 57650481

Gene position: 1605510-1605121 (Counterclockwise)

Preceding gene: 57650482

Following gene: 57650480

Centisome position: 57.15

GC content: 30.0

Gene sequence:

>390_bases
ATGAGTCGTAAAGAATCCCGAGTGCAAGCTTTTCAAACTTTATTTCAATTAGAAATGAAGGACAGTGATTTAACGATAAA
TGAAGCGATAAGCTTTATTAAAGACGATAATCCAGATTTAGACTTCGAATTTATTCATTGGCTAGTTTCTGGCGTTAAAG
ATCACGAACCTGTATTAGACGAGACAATTAGTCCTTATTTAAAAGATTGGACTATTGCACGTTTATTAAAAACGGATCGT
ATTATTTTAAGAATGGCAACATATGAAATATTACACAGTGATACACCTGCTAAAGTCGTAATGAATGAAGCAGTTGAATT
AACAAAACAATTCAGTGATGATGATCATTATAAATTTATAAATGGTGTATTGAGTAATATAAAAAAATAA

Upstream 100 bases:

>100_bases
AAATTAATATTCACATTACACAAATCGTTATTGAAAAGTAATGTCATACCTAATTCAGTAATTAAATAAAGAAAAATACA
AACGTTTGAAGGAGTTAAAA

Downstream 100 bases:

>100_bases
AATTGAGTGATGTTATATGTCAGATTATTTAAGTGTTTCAGCTTTAACGAAATATATTAAATATAAATTTGATCAAGATC
CACATCTCCAATCTGTATTG

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDR
IILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK

Sequences:

>Translated_129_residues
MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDR
IILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
>Mature_128_residues
SRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRI
ILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=116, Percent_Identity=35.3448275862069, Blast_Score=73, Evalue=5e-15,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_STAA1 (A7X2Q3)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442102.1
- ProteinModelPortal:   A7X2Q3
- SMR:   A7X2Q3
- STRING:   A7X2Q3
- EnsemblBacteria:   EBSTAT00000004487
- GeneID:   5560033
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_1512
- eggNOG:   COG0781
- GeneTree:   EBGT00050000025379
- HOGENOM:   HBG734409
- OMA:   FAYDYDK
- ProtClustDB:   PRK00202
- BioCyc:   SAUR418127:SAHV_1512-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 15061; Mature: 14930

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLD
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHH
ETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
NGVLSNIKK
HHHHHHHCC
>Mature Secondary Structure 
SRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLD
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHH
ETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
NGVLSNIKK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA