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The map label for this gene is yqjE [H]

Identifier: 57650467

GI number: 57650467

Start: 1591772

End: 1592905

Strand: Reverse

Name: yqjE [H]

Synonym: SACOL1555

Alternate gene names: 57650467

Gene position: 1592905-1591772 (Counterclockwise)

Preceding gene: 57650469

Following gene: 57650466

Centisome position: 56.7

GC content: 36.33

Gene sequence:

>1134_bases
ATGATTAATGAGCAAAGATTACTTAATACGTTTTTTGAACTTGTACAAATCGATTCTGAGACAGGGAATGAATCAACAAT
CCAACCTATTTTAAAAGAAAAATTCATAGCATTAGGGTTAGATGTTAAAGAAGATGAAGCGGCTAAACATCCTAAATTAG
GTGCCAATAATCTAGTGTGTACAATGAATAGTACTATCGAAGAAGGCGAAGTACCTAAATTATATTTGACGAGCCATATG
GATACTGTTGTACCCGCAATTAATGTAAAGCCAATTGTAAAAGATGACGGCTACATATACTCTGATGGTACGACTATTCT
AGGTGCAGATGATAAAGCAGGATTAGCAGCGATGCTTGAAGTTTTGCAAGTGATAAAGGAACAACAAATCCCACATGGAC
AAATTCAATTTGTGATTACTGTTGGAGAAGAATCAGGTTTAATTGGTGCTAAAGAATTAAATTCAGAGTTGTTGGACGCG
GACTTTGGTTATGCTATTGATGCAAGTGCTGATGTCGGTACTACGGTTGTAGGTGCACCGACGCAAATGTTAATTTCAGC
TAAAATTTTTGGCAAAACGGCTCATGCAAGTACGCCAAAAGAGGGTGTTAGTGCTATTAATATTGCGGCGAAAGCAATTA
GTCGAATGAAATTAGGACAAGTTGATGAAATAACTACTGCCAATATTGGTAAGTTTCATGGCGGTTCAGCTACGAATATT
GTTGCAGATGAAGTCATTTTAGAAGCAGAGGCACGTTCTCACGATCCAGAAAGAATAAAAACACAAGTCAAACATATGAC
TGATGTGTTTGAAACTACTGCATCAGAATTAGGTGGGAAAGCAGTAGTTACAGTGGAGCAAAGTTATCCAGGATTTAAAA
TTAATGATAATGAAGCGGTTGTTAAAATTGCACAAGAAAGTGCTCGTAATTTAGGATTATCTGCAAATACAATTATTTCT
GGTGGCGGTTCAGACGGCAGTATTATTAATACATTTGGTATTCCTTCAGTCATTTTAGGAGTGGGTTATGAAAAAATCCA
TACAACAAATGAGAGAATGCCGATTAAATCATTGAACTTGCTTGCAAGTCAAGTGTTAGAAATAATCAAAATAGTTGCGC
GACATTCGAAATGA

Upstream 100 bases:

>100_bases
AAACCTGATAAATCTGTGTAACGTCAATTACTGTAACATTTTATTTCATCAATTTTTACCGTTTGGCGTACATGAAAATT
TTGATAAAAGGGGTTCCATT

Downstream 100 bases:

>100_bases
TTTAGTGTAGTGTATGTCTATTTTGTGATACAATACTAATGAAAAATCAACAAGTGAGGTAAGTAATATGACACAACAAA
TTGGAGTTATTGGTTTAGCC

Product: M20/M25/M40 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MINEQRLLNTFFELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHM
DTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDA
DFGYAIDASADVGTTVVGAPTQMLISAKIFGKTAHASTPKEGVSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNI
VADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAVVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTIIS
GGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARHSK

Sequences:

>Translated_377_residues
MINEQRLLNTFFELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHM
DTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDA
DFGYAIDASADVGTTVVGAPTQMLISAKIFGKTAHASTPKEGVSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNI
VADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAVVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTIIS
GGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARHSK
>Mature_377_residues
MINEQRLLNTFFELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHM
DTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDA
DFGYAIDASADVGTTVVGAPTQMLISAKIFGKTAHASTPKEGVSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNI
VADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAVVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTIIS
GGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARHSK

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=416, Percent_Identity=23.3173076923077, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.4.11.4 [C]

Molecular weight: Translated: 40244; Mature: 40244

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00758 ARGE_DAPE_CPG2_1 ; PS00759 ARGE_DAPE_CPG2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINEQRLLNTFFELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVC
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEE
TMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLE
EECCCCCCCCCCEEEEECCHHHHCCCCCCEEEEECCCEEEECCCEEEECCCCCCHHHHHH
VLQVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAP
HHHHHHHHCCCCCCEEEEEEECCCCCCEEHHHHHHHHHCCCCCEEEECCCCCCCEEECCC
TQMLISAKIFGKTAHASTPKEGVSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNI
HHHHEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
VADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAVVTVEQSYPGFKINDNEAV
HHHHHHEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCHHH
VKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNL
HHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCHHHHHHCCHHHHCCCCCCCCHHHHHH
LASQVLEIIKIVARHSK
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINEQRLLNTFFELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVC
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEE
TMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLE
EECCCCCCCCCCEEEEECCHHHHCCCCCCEEEEECCCEEEECCCEEEECCCCCCHHHHHH
VLQVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAP
HHHHHHHHCCCCCCEEEEEEECCCCCCEEHHHHHHHHHCCCCCEEEECCCCCCCEEECCC
TQMLISAKIFGKTAHASTPKEGVSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNI
HHHHEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
VADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAVVTVEQSYPGFKINDNEAV
HHHHHHEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCHHH
VKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNL
HHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCCHHHHHHCCHHHHCCCCCCCCHHHHHH
LASQVLEIIKIVARHSK
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]