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The map label for this gene is fer

Identifier: 57650439

GI number: 57650439

Start: 1564396

End: 1564644

Strand: Direct

Name: fer

Synonym: SACOL1525

Alternate gene names: NA

Gene position: 1564396-1564644 (Clockwise)

Preceding gene: 57650433

Following gene: 57650452

Centisome position: 55.68

GC content: 38.55

Gene sequence:

>249_bases
TTGGCAAAATATACAATCGTTGATATGGATACTTGTATTGCATGTGGTGCATGCGGTGCAGCAGCGCCAGATATATATGA
TTACGACGACGAAGGTATTGCTTTCGTAATCCTTGACGATAACCAAGGTACTGCAGAAGTACCTGAGGAATTATATGAAG
ATATGGAAGATGCAATTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAA
TTTGAATAA

Upstream 100 bases:

>100_bases
CCTCACTCTGTAAAACGGATAATTTGAAAATAAAAATGATGCTGTCTAAAATTTTAGTCACATTACTATTTTAGCATTTT
TATCAAAGGAGGCGAAGACA

Downstream 100 bases:

>100_bases
TTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGGCAAGCTATCGTTTATTGATAGTCACCTGCTTTTTATTATTATG
TGTATATTATTTTGCTTTAA

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDAIDGCPTDSIKIADESFDGDALK
FE

Sequences:

>Translated_82_residues
MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDAIDGCPTDSIKIADESFDGDALK
FE
>Mature_81_residues
AKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDAIDGCPTDSIKIADESFDGDALKF
E

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1141

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001080
- InterPro:   IPR017896 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8841; Mature: 8709

Theoretical pI: Translated: 3.24; Mature: 3.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDAID
CCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC
GCPTDSIKIADESFDGDALKFE
CCCCCCEEEECCCCCCCEEECC
>Mature Secondary Structure 
AKYTIVDMDTCIACGACGAAAPDIYDYDDEGIAFVILDDNQGTAEVPEELYEDMEDAID
CCEEEEECCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC
GCPTDSIKIADESFDGDALKFE
CCCCCCEEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3351918; 2600971; 11827483 [H]