Definition | Campylobacter jejuni RM1221, complete genome. |
---|---|
Accession | NC_003912 |
Length | 1,777,831 |
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The map label for this gene is 57238091
Identifier: 57238091
GI number: 57238091
Start: 1267270
End: 1269810
Strand: Reverse
Name: 57238091
Synonym: CJE1354
Alternate gene names: NA
Gene position: 1269810-1267270 (Counterclockwise)
Preceding gene: 57238094
Following gene: 57238090
Centisome position: 71.42
GC content: 28.45
Gene sequence:
>2541_bases ATGAAAAAGATTTTTTATGGCATTGTAGCTTTTGTTGTTGTGCTTTTAATCGCTCTTTGTACCATACTTTTTACAAGTTT TGGTAATAATATAGTGGCAAATATAGCACAAAAAAAGATCAAAGAAAATGCGGGATTAGATGTAAATATCACGCGTTTTA ATTTGCGTTTTTCAAGTCTTGAACTGCAAGCAAATATTGCAAATATGGCAGATTTCAATCTCAAGGGAGCTTTGAGTCCT TTTAAGCTTGGATTTGATCTTGACTATCTTATTTCTTTAAAGCAAAATTATGCTAAAAATTTAGGTTTAAATTTAAATCA AAACCTTTCTTTTGGCGGTAAAATTCAAGGCAAGGCAAGTGATTTTACTTTAGATGGAAGGGGTTACTTACTAGGTTCAA ATGTATTTTTAAATGCGAGAATGTATAATTACAGCCCTATCGCTTTAAATTTAGATGCAAAAAATCTTAAGATAGAAGAA ATACTTCATCTTTTATCTTATCCTAGTTATGCTAAAGGTTTTTTAAATGCTCAGGCAAAAATTTCAGCACAGAATTTAAA ACCTGATGGAAATATTATCATAAAACTTGATACAAGCTATATAAACTACGAGGCGATAAAAAAAGATTTTTCTTTAGACT TGCCTTTAAATTCTAATCCTAAAGCAGAAATTTTAGCCAATGTTAAAGAAGATAAGATTTATGCTGTAAGTAAAATTTAC AATGATTATCTTAACTTACAAACCCAAAAAACTCTTTATGATATGAGTAAGAATATTTTAAGTACTGATTTTAATTTAAA TATTCCTTCTCTTGCAAAGCTTGAAAAACTTACAAAAACTAGATTAAATGGTAGTTTGGGCGTGATAGGCGAAACAAGTG TTGTAAATAATGCCTTATCAAGTTTAAATGCTCAAGTTATCGGACTTGGTGGAGAGGTAAAGGCAAGTTTGAAACATAAT AAAATTTTTGCAGATATTAATGAAGCAAGTTTGGAAAAATTATTAGCTCTTGCAGGATATGGAGCCTTAGTTTCTGGAAA TTTAAATGCTAAACTTTTAAATGCGGATTTGGATTTTTCTAATTTCGATCTTGAGGCAAAAATAAACAATGCAAAGATTA ACACCAATGAGCTTAAAAAAATTGCTAAAATAGAACTTCCAAATACAATTTTTAGTCTTGATGCTAAAGCAAATGCAAAA AATAGTAATATTTCTTACAATGCTTTACTTGCTTCAAATTTACTTAATATCAAAAAACTTCAAGGAACTTATAATTTAAA AAATAGTGAGTTAAATACAGATTTAAATGCTTTTATTGATGATTTGTCTCAGTTTAGTGCTATAGCGGGACAAAAATTAC AAGGTAAGGCAGATCTTAATGCAAAAGCTCATATTATAGGTACTCAAATACAAAATTTAAATGCAAATGCAAATTTGGCA GATGGCGTAATCAAAGCTGATTCAAATGGTAAAAAACTTGATTTGAACATTGATAAACTTGATTTATCTAAACTTTTTGT TATAGCAGGTATGCCAAATTATGCCAGTGGGGTTGTTAATGCAAAAGTTAATTTAGATAATATCGATTTTAACAACCTTA ATGGTAAAGCAAATTTAGAGGCTAAAGGCATTTTAAATGCTGCAACTTTAAGTAAAATTTTAAATAAAAATTTTCCAAAC AATACAAGTTATGATTTAAATACCAAAATTAATTTTAAAAACAATATCGCTCAATTTGATTCTGTTTTAAATTCATCTTT AGCTGATCTTACAAAACTACAAGGAAGTTTTGATATAAGCAAAATGCTTTTAAATTCGGATTTTAATTTAAAGATAAATG ATTTTTCAAAACTAGGCTTTTTGTTAGATAGAAAACTTAAAGGTAAGGCAGAATTTAATGGAAAGGTAGGTTTTGATAAG AGTTTAAATTTTGTTGTAAATAGTCCAAATTTATTTGAAGGGAGGCTTCAAAGCACATTTAAAGATAACCTTTTGCTTGC TGATTTAAACGGAGTGGATTTAAGTAGTCTAGCTCAGGGTTTGGATTTTATGGATATTTATCAAGGTAAGGCGGACATGA AGGCAAATTACAATCTTTTAAGCGAAGAAGGCGAGGTTAATTTGGATATGAAAGAGGGTAAATTAAAACCAAATCTTATT ACCAATGCTTTAAAAATTTTAACATTAAAAGATATTACAGATGATGTTTATCGTACTGCTAATGCTAAAGCTTTGATTAA AAAAGAAAATATCAAACTTGATCTTAATATGCAAGCAGATCGTTCTTATATTTTAGTACAATCAGGAGCTTTAAATTCTA AAAGTGGAGCTTTAAATTTGCCTTTTGATATTAAACTCGATAGAGCTAATTTTAAAGGAAGTATTACAGGAACTACAGAA AATCCTAAAGTAAATTTAAATGCAGGAAGTGTTTTAAATTCTATTAAAAATGTAGTAGGTGGCGGCGTGAGTGATGGTGC TAAAAATACAGGCAATAAAGTGGATAAAGCGGTAAATAAATTATTAAATAAGATTTTCTAA
Upstream 100 bases:
>100_bases CTATAAAAAATGAATTTTGTCAATACTTTAAATTAAAATATTTATAAAAGTTTAGTTTTATAGACTAAAGTTATTTTATA AAATAAACTAAAGGATAAAA
Downstream 100 bases:
>100_bases GGTAAAAAATGTTTAATGGACTCATAAGAGAAATTGCCAAAGTTCAATCTTATCAAAACAATACTTTAAGTTTAACAGCT AAGCATCGTCCAAATCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MKKIFYGIVAFVVVLLIALCTILFTSFGNNIVANIAQKKIKENAGLDVNITRFNLRFSSLELQANIANMADFNLKGALSP FKLGFDLDYLISLKQNYAKNLGLNLNQNLSFGGKIQGKASDFTLDGRGYLLGSNVFLNARMYNYSPIALNLDAKNLKIEE ILHLLSYPSYAKGFLNAQAKISAQNLKPDGNIIIKLDTSYINYEAIKKDFSLDLPLNSNPKAEILANVKEDKIYAVSKIY NDYLNLQTQKTLYDMSKNILSTDFNLNIPSLAKLEKLTKTRLNGSLGVIGETSVVNNALSSLNAQVIGLGGEVKASLKHN KIFADINEASLEKLLALAGYGALVSGNLNAKLLNADLDFSNFDLEAKINNAKINTNELKKIAKIELPNTIFSLDAKANAK NSNISYNALLASNLLNIKKLQGTYNLKNSELNTDLNAFIDDLSQFSAIAGQKLQGKADLNAKAHIIGTQIQNLNANANLA DGVIKADSNGKKLDLNIDKLDLSKLFVIAGMPNYASGVVNAKVNLDNIDFNNLNGKANLEAKGILNAATLSKILNKNFPN NTSYDLNTKINFKNNIAQFDSVLNSSLADLTKLQGSFDISKMLLNSDFNLKINDFSKLGFLLDRKLKGKAEFNGKVGFDK SLNFVVNSPNLFEGRLQSTFKDNLLLADLNGVDLSSLAQGLDFMDIYQGKADMKANYNLLSEEGEVNLDMKEGKLKPNLI TNALKILTLKDITDDVYRTANAKALIKKENIKLDLNMQADRSYILVQSGALNSKSGALNLPFDIKLDRANFKGSITGTTE NPKVNLNAGSVLNSIKNVVGGGVSDGAKNTGNKVDKAVNKLLNKIF
Sequences:
>Translated_846_residues MKKIFYGIVAFVVVLLIALCTILFTSFGNNIVANIAQKKIKENAGLDVNITRFNLRFSSLELQANIANMADFNLKGALSP FKLGFDLDYLISLKQNYAKNLGLNLNQNLSFGGKIQGKASDFTLDGRGYLLGSNVFLNARMYNYSPIALNLDAKNLKIEE ILHLLSYPSYAKGFLNAQAKISAQNLKPDGNIIIKLDTSYINYEAIKKDFSLDLPLNSNPKAEILANVKEDKIYAVSKIY NDYLNLQTQKTLYDMSKNILSTDFNLNIPSLAKLEKLTKTRLNGSLGVIGETSVVNNALSSLNAQVIGLGGEVKASLKHN KIFADINEASLEKLLALAGYGALVSGNLNAKLLNADLDFSNFDLEAKINNAKINTNELKKIAKIELPNTIFSLDAKANAK NSNISYNALLASNLLNIKKLQGTYNLKNSELNTDLNAFIDDLSQFSAIAGQKLQGKADLNAKAHIIGTQIQNLNANANLA DGVIKADSNGKKLDLNIDKLDLSKLFVIAGMPNYASGVVNAKVNLDNIDFNNLNGKANLEAKGILNAATLSKILNKNFPN NTSYDLNTKINFKNNIAQFDSVLNSSLADLTKLQGSFDISKMLLNSDFNLKINDFSKLGFLLDRKLKGKAEFNGKVGFDK SLNFVVNSPNLFEGRLQSTFKDNLLLADLNGVDLSSLAQGLDFMDIYQGKADMKANYNLLSEEGEVNLDMKEGKLKPNLI TNALKILTLKDITDDVYRTANAKALIKKENIKLDLNMQADRSYILVQSGALNSKSGALNLPFDIKLDRANFKGSITGTTE NPKVNLNAGSVLNSIKNVVGGGVSDGAKNTGNKVDKAVNKLLNKIF >Mature_846_residues MKKIFYGIVAFVVVLLIALCTILFTSFGNNIVANIAQKKIKENAGLDVNITRFNLRFSSLELQANIANMADFNLKGALSP FKLGFDLDYLISLKQNYAKNLGLNLNQNLSFGGKIQGKASDFTLDGRGYLLGSNVFLNARMYNYSPIALNLDAKNLKIEE ILHLLSYPSYAKGFLNAQAKISAQNLKPDGNIIIKLDTSYINYEAIKKDFSLDLPLNSNPKAEILANVKEDKIYAVSKIY NDYLNLQTQKTLYDMSKNILSTDFNLNIPSLAKLEKLTKTRLNGSLGVIGETSVVNNALSSLNAQVIGLGGEVKASLKHN KIFADINEASLEKLLALAGYGALVSGNLNAKLLNADLDFSNFDLEAKINNAKINTNELKKIAKIELPNTIFSLDAKANAK NSNISYNALLASNLLNIKKLQGTYNLKNSELNTDLNAFIDDLSQFSAIAGQKLQGKADLNAKAHIIGTQIQNLNANANLA DGVIKADSNGKKLDLNIDKLDLSKLFVIAGMPNYASGVVNAKVNLDNIDFNNLNGKANLEAKGILNAATLSKILNKNFPN NTSYDLNTKINFKNNIAQFDSVLNSSLADLTKLQGSFDISKMLLNSDFNLKINDFSKLGFLLDRKLKGKAEFNGKVGFDK SLNFVVNSPNLFEGRLQSTFKDNLLLADLNGVDLSSLAQGLDFMDIYQGKADMKANYNLLSEEGEVNLDMKEGKLKPNLI TNALKILTLKDITDDVYRTANAKALIKKENIKLDLNMQADRSYILVQSGALNSKSGALNLPFDIKLDRANFKGSITGTTE NPKVNLNAGSVLNSIKNVVGGGVSDGAKNTGNKVDKAVNKLLNKIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92333; Mature: 92333
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFYGIVAFVVVLLIALCTILFTSFGNNIVANIAQKKIKENAGLDVNITRFNLRFSSL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEE ELQANIANMADFNLKGALSPFKLGFDLDYLISLKQNYAKNLGLNLNQNLSFGGKIQGKAS EEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCC DFTLDGRGYLLGSNVFLNARMYNYSPIALNLDAKNLKIEEILHLLSYPSYAKGFLNAQAK CEEECCCCEEEECCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHCCCCEE ISAQNLKPDGNIIIKLDTSYINYEAIKKDFSLDLPLNSNPKAEILANVKEDKIYAVSKIY EEECCCCCCCCEEEEECCCEECHHHHHCCCEEECCCCCCCCHHHEECCCCCCEEHHHHHH NDYLNLQTQKTLYDMSKNILSTDFNLNIPSLAKLEKLTKTRLNGSLGVIGETSVVNNALS HHHHCCCHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHH SLNAQVIGLGGEVKASLKHNKIFADINEASLEKLLALAGYGALVSGNLNAKLLNADLDFS HCCCEEEECCCCEEEEEECCEEEEECCHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCC NFDLEAKINNAKINTNELKKIAKIELPNTIFSLDAKANAKNSNISYNALLASNLLNIKKL CCEEEEEECCCEECHHHHHHHHEEECCCCEEEECCCCCCCCCCEEEEHHHHHHCHHHEEE QGTYNLKNSELNTDLNAFIDDLSQFSAIAGQKLQGKADLNAKAHIIGTQIQNLNANANLA CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCC DGVIKADSNGKKLDLNIDKLDLSKLFVIAGMPNYASGVVNAKVNLDNIDFNNLNGKANLE CCEEEECCCCCEEEEEECEECCCEEEEEECCCCHHCCEEEEEEEECCCCCCCCCCCCCEE AKGILNAATLSKILNKNFPNNTSYDLNTKINFKNNIAQFDSVLNSSLADLTKLQGSFDIS CCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHH KMLLNSDFNLKINDFSKLGFLLDRKLKGKAEFNGKVGFDKSLNFVVNSPNLFEGRLQSTF HHHHCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHH KDNLLLADLNGVDLSSLAQGLDFMDIYQGKADMKANYNLLSEEGEVNLDMKEGKLKPNLI CCCEEEEECCCCCHHHHHCCCCHHHHHCCCCCCCCCCEEECCCCCEEEECCCCCCCCHHH TNALKILTLKDITDDVYRTANAKALIKKENIKLDLNMQADRSYILVQSGALNSKSGALNL HHHHHEEEEHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCEEEC PFDIKLDRANFKGSITGTTENPKVNLNAGSVLNSIKNVVGGGVSDGAKNTGNKVDKAVNK CEEEEEECCCCCEEEECCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LLNKIF HHHHCC >Mature Secondary Structure MKKIFYGIVAFVVVLLIALCTILFTSFGNNIVANIAQKKIKENAGLDVNITRFNLRFSSL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEE ELQANIANMADFNLKGALSPFKLGFDLDYLISLKQNYAKNLGLNLNQNLSFGGKIQGKAS EEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCC DFTLDGRGYLLGSNVFLNARMYNYSPIALNLDAKNLKIEEILHLLSYPSYAKGFLNAQAK CEEECCCCEEEECCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHCCCCEE ISAQNLKPDGNIIIKLDTSYINYEAIKKDFSLDLPLNSNPKAEILANVKEDKIYAVSKIY EEECCCCCCCCEEEEECCCEECHHHHHCCCEEECCCCCCCCHHHEECCCCCCEEHHHHHH NDYLNLQTQKTLYDMSKNILSTDFNLNIPSLAKLEKLTKTRLNGSLGVIGETSVVNNALS HHHHCCCHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHH SLNAQVIGLGGEVKASLKHNKIFADINEASLEKLLALAGYGALVSGNLNAKLLNADLDFS HCCCEEEECCCCEEEEEECCEEEEECCHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCC NFDLEAKINNAKINTNELKKIAKIELPNTIFSLDAKANAKNSNISYNALLASNLLNIKKL CCEEEEEECCCEECHHHHHHHHEEECCCCEEEECCCCCCCCCCEEEEHHHHHHCHHHEEE QGTYNLKNSELNTDLNAFIDDLSQFSAIAGQKLQGKADLNAKAHIIGTQIQNLNANANLA CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCC DGVIKADSNGKKLDLNIDKLDLSKLFVIAGMPNYASGVVNAKVNLDNIDFNNLNGKANLE CCEEEECCCCCEEEEEECEECCCEEEEEECCCCHHCCEEEEEEEECCCCCCCCCCCCCEE AKGILNAATLSKILNKNFPNNTSYDLNTKINFKNNIAQFDSVLNSSLADLTKLQGSFDIS CCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHH KMLLNSDFNLKINDFSKLGFLLDRKLKGKAEFNGKVGFDKSLNFVVNSPNLFEGRLQSTF HHHHCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHH KDNLLLADLNGVDLSSLAQGLDFMDIYQGKADMKANYNLLSEEGEVNLDMKEGKLKPNLI CCCEEEEECCCCCHHHHHCCCCHHHHHCCCCCCCCCCEEECCCCCEEEECCCCCCCCHHH TNALKILTLKDITDDVYRTANAKALIKKENIKLDLNMQADRSYILVQSGALNSKSGALNL HHHHHEEEEHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCEEEC PFDIKLDRANFKGSITGTTENPKVNLNAGSVLNSIKNVVGGGVSDGAKNTGNKVDKAVNK CEEEEEECCCCCEEEECCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LLNKIF HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA