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The map label for this gene is ftsY [H]

Identifier: 57238078

GI number: 57238078

Start: 1256227

End: 1257093

Strand: Reverse

Name: ftsY [H]

Synonym: CJE1340

Alternate gene names: 57238078

Gene position: 1257093-1256227 (Counterclockwise)

Preceding gene: 57238079

Following gene: 57238077

Centisome position: 70.71

GC content: 32.41

Gene sequence:

>867_bases
ATGTTTAATTTTTTTAAAAAAGGACTTGCAAAAACTCTTGAAAATATTGTTGGAGTTAAAGGAGAGAATAAAAAGATAAC
CAAAGATTTGCTTGAAGAAATTTTGCTTGAAGCAGATGTAAGTTATGAAATAGTTGAAGAGATAATTTATTATTTACCAC
CTCAAAATGAAGTAAAAAAAGAAGATTTAAAGCGTGTTATGGGTTCTTATTTTCTTTATGAAAAAAAAGAAACCAATCAA
GAAAAACCTTTTGTAGAGCTTATTTTAGGAGTAAATGGAGCAGGAAAAACAACAAGTATTGCCAAGCTTGCTTATTTATA
CAAAAACCAAAATCAAAAAGTGATTTTAGGAGCGTGTGATACTTTTAGAGCAGGTGCGATTGAGCAATTAAAACTTTGGG
CGCAAAAAGTGGATGTAGATATAGTTTTAACTGCACAAGGGCATGATCCTTCAGCGGTTGCTTTTGATACCATTTCTAAA
GCAAAAGCAAAGGATTTTGATAGAGTTATTATCGATACAGCAGGGCGTTTGCAAAATCAAAAAAATTTAGCTCATGAGCT
TGAAAAAATTGTAAGAATTTCAAACAAAGCTTTAGAAGGCGCACCCCATAGAAAAATTTTAGTTTTAGATGGAACACAGG
GAAATGCTGGAATTTTACAAGCTAAAGCTTTTAATGAGCTTGTAAAACTTGATGGTGTGATTATCACAAAGCTTGATGGG
ACAGCTAAAGGGGGTGCACTTTTTAGTATAGCAAGAGAGCTTGAGCTTCCTATTTTTTATGTAGGCGTGGGTGAGCAAAT
GACGGATTTGCAAGAATTTAATGCAAATGCTTACTTAGATACTTTATTAGATCCTATTTTTGAATAA

Upstream 100 bases:

>100_bases
CCATGTTTCTTTACAACAAGCATTCTAAATTGATTAATCAGTATTTAGGGCTTATTCCTGAAGAAATGCTAGAAATTGAT
ATACAAAAGGCTATACTTTA

Downstream 100 bases:

>100_bases
TGGCAAAAAATAAAGCACTTTTTGAATGTCAAGCCTGTGGAAATCAACAAAGTAAATGGCTTGGAAAATGTCCTGATTGT
GGAGCTTGGGATAGTTTTGT

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEIVEEIIYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQ
EKPFVELILGVNGAGKTTSIAKLAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISK
AKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGILQAKAFNELVKLDGVIITKLDG
TAKGGALFSIARELELPIFYVGVGEQMTDLQEFNANAYLDTLLDPIFE

Sequences:

>Translated_288_residues
MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEIVEEIIYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQ
EKPFVELILGVNGAGKTTSIAKLAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISK
AKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGILQAKAFNELVKLDGVIITKLDG
TAKGGALFSIARELELPIFYVGVGEQMTDLQEFNANAYLDTLLDPIFE
>Mature_288_residues
MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEIVEEIIYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQ
EKPFVELILGVNGAGKTTSIAKLAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISK
AKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGILQAKAFNELVKLDGVIITKLDG
TAKGGALFSIARELELPIFYVGVGEQMTDLQEFNANAYLDTLLDPIFE

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=281, Percent_Identity=32.0284697508897, Blast_Score=131, Evalue=7e-31,
Organism=Homo sapiens, GI226371618, Length=199, Percent_Identity=36.6834170854271, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI295424842, Length=270, Percent_Identity=28.5185185185185, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI23308697, Length=270, Percent_Identity=28.5185185185185, Blast_Score=114, Evalue=7e-26,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=34.8148148148148, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1789874, Length=223, Percent_Identity=46.1883408071749, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1788963, Length=301, Percent_Identity=32.890365448505, Blast_Score=141, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17539958, Length=199, Percent_Identity=34.6733668341709, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=221, Percent_Identity=34.3891402714932, Blast_Score=119, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6325345, Length=213, Percent_Identity=37.0892018779343, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=239, Percent_Identity=31.7991631799163, Blast_Score=105, Evalue=9e-24,
Organism=Drosophila melanogaster, GI17647949, Length=202, Percent_Identity=38.6138613861386, Blast_Score=136, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24641198, Length=226, Percent_Identity=30.0884955752212, Blast_Score=112, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 32049; Mature: 32049

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEIVEEIIYYLPPQNEVKK
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
EDLKRVMGSYFLYEKKETNQEKPFVELILGVNGAGKTTSIAKLAYLYKNQNQKVILGACD
HHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECC
TFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISKAKAKDFDRVIIDTAGRLQNQ
CCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGILQAKAFNELVKLDGVIITKLDG
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHCCEEEEEECC
TAKGGALFSIARELELPIFYVGVGEQMTDLQEFNANAYLDTLLDPIFE
CCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEIVEEIIYYLPPQNEVKK
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
EDLKRVMGSYFLYEKKETNQEKPFVELILGVNGAGKTTSIAKLAYLYKNQNQKVILGACD
HHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECC
TFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISKAKAKDFDRVIIDTAGRLQNQ
CCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGILQAKAFNELVKLDGVIITKLDG
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHCCEEEEEECC
TAKGGALFSIARELELPIFYVGVGEQMTDLQEFNANAYLDTLLDPIFE
CCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]