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The map label for this gene is aer [H]

Identifier: 57238061

GI number: 57238061

Start: 1237973

End: 1238470

Strand: Reverse

Name: aer [H]

Synonym: CJE1323

Alternate gene names: 57238061

Gene position: 1238470-1237973 (Counterclockwise)

Preceding gene: 57238062

Following gene: 57238060

Centisome position: 69.66

GC content: 28.31

Gene sequence:

>498_bases
ATGTCAAGAGAAATTTTTTTACAAGAAGATAGTTTAATTACTTCTAAAACAGATTTAAAAGGTAAAATAGTTTATGCAAA
TGATGATTTTTTAAAGTATGCAGGTTATACCATGGGTGAAGTTTTAAATAAACCTCATAACATAGTAAGACATGAAGAGA
TGCCAAAAACTGTTTTTAAATATTTATGGGATTATATGAAAGAAGGCAAAGAAATTTTTGCTTACGTAAAAAATAAAACC
AAAGATAACAATTACTATTGGGTTTTTGCAAATGTAACCCCATCAATAGATGTTAATAATAATATCATAGGCTATTATTC
CGTTCGTCGTATGCCAAATAAAAGCGCTATTTCTACAATAGAAAGTCTTTATAGCGATCTTTTAAGAGCAGAACAGCAAC
AAGGCTTAAATAAGGGTGTTGAGATGCTTAAAAATTTCTGCAAAGATGCAGATAAAACTTATAATGAGCTAATCTTTTCT
CTTCAAGAAGCTAAATAA

Upstream 100 bases:

>100_bases
AAAAAGCTTATGATGCGATTGTAAATGATATTAAATCACTAGAGCAAAGAAGTGCTGAAATCTTAGCAAAATTAAAAATA
TAAATTAAGAGGGTGGGAAA

Downstream 100 bases:

>100_bases
ATTTTTGTTAGACTTAAAACGAGTTTGTTTTAAGTCTAAGTATTATATAATCTTTCTTTTAAAAATTCACATTTTTCAAG
GCAAAATATGTTTGATGTCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNKPHNIVRHEEMPKTVFKYLWDYMKEGKEIFAYVKNKT
KDNNYYWVFANVTPSIDVNNNIIGYYSVRRMPNKSAISTIESLYSDLLRAEQQQGLNKGVEMLKNFCKDADKTYNELIFS
LQEAK

Sequences:

>Translated_165_residues
MSREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNKPHNIVRHEEMPKTVFKYLWDYMKEGKEIFAYVKNKT
KDNNYYWVFANVTPSIDVNNNIIGYYSVRRMPNKSAISTIESLYSDLLRAEQQQGLNKGVEMLKNFCKDADKTYNELIFS
LQEAK
>Mature_164_residues
SREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNKPHNIVRHEEMPKTVFKYLWDYMKEGKEIFAYVKNKTK
DNNYYWVFANVTPSIDVNNNIIGYYSVRRMPNKSAISTIESLYSDLLRAEQQQGLNKGVEMLKNFCKDADKTYNELIFSL
QEAK

Specific function: Signal transducer for aerotaxis. The aerotactic response is the accumulation of cells around air bubbles. The nature of the sensory stimulus detected by this protein is the proton motive force or cellular redox state. It uses a FAD prosthetic group as a r

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=140, Percent_Identity=36.4285714285714, Blast_Score=107, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF08447 PAS_3 [H]

EC number: NA

Molecular weight: Translated: 19313; Mature: 19182

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNKPHNIVRHEEMPKTVFK
CCCCEEEECCCEECCCCCCCEEEEEECCCHHHHCCCHHHHHHCCCHHHHHHHCCHHHHHH
YLWDYMKEGKEIFAYVKNKTKDNNYYWVFANVTPSIDVNNNIIGYYSVRRMPNKSAISTI
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCEEEEEEECCCCCHHHHHHH
ESLYSDLLRAEQQQGLNKGVEMLKNFCKDADKTYNELIFSLQEAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNKPHNIVRHEEMPKTVFK
CCCEEEECCCEECCCCCCCEEEEEECCCHHHHCCCHHHHHHCCCHHHHHHHCCHHHHHH
YLWDYMKEGKEIFAYVKNKTKDNNYYWVFANVTPSIDVNNNIIGYYSVRRMPNKSAISTI
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCEEEEEEECCCCCHHHHHHH
ESLYSDLLRAEQQQGLNKGVEMLKNFCKDADKTYNELIFSLQEAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9190831; 9380671 [H]