| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is copA [H]
Identifier: 57238030
GI number: 57238030
Start: 1206663
End: 1209014
Strand: Reverse
Name: copA [H]
Synonym: CJE1291
Alternate gene names: 57238030
Gene position: 1209014-1206663 (Counterclockwise)
Preceding gene: 57238033
Following gene: 57238029
Centisome position: 68.01
GC content: 30.65
Gene sequence:
>2352_bases ATGAAATGTGAACATTGCAAACTTGATTATAAACAAGCCCAAATGATAGAGTATAAGGGTAAATTTTTTTGTTGTAAAGG TTGTAAGAGCGTTTGGGAAATTTTACATGAAAGTGGATTAGATGAGTTTTATGAAAAGCTTGGAAATCAAACTTTAAGCC CTGTAAATTTTCAAAATGAAATGAAAAATTATGATGAGTTTATCACTAAAACCAAAGAAGGATTTAGTGAAATTTATCTC ATGATACACGGTATAGAATGTGCAGCTTGTGTGTGGCTTAATGAGAAAATTTTAACCAAACAAGAAGGAATTTTAGAACT TGATATTAATCATTTAAACCATAAAGCACGCATTGTTTTTGATGAGCAAAGCATTTCTTTGGTGCAAATTTTAAGACTTA TTGAAAGCATAGGCTATAAAGCGAGTGCTTATGATGCGAGCAAGGCTTCAAAAAAAGCGGATTTACTAAAAAGGGAATTT TATTCTAAGCTTGTTGTGGCTATAGCTTGTGTGATGAATATCATGTGGATAGCAGTGGCAAAATACGCAGGATTTTTTAG CGGTATGGATAAGGACACTAAGGATATTTTAAATTTTGCTGAATTTATCCTTTGTTCTCCTGTGCTTTTTTATACGGGAT CTCATTTTTATAAAAGTGCTTTTAAAACTTTAAAAATGCATAGTTTAAATATGGATGTATTGGTGATTAGCGGAGCGAGT TTGGCTTATGTTTATTCTTTATGGGCCATGTTTTTTAGGGTAGGGGAAGTGTATTTTGACTCTGTGGCGATGATAATTTG CTTTGTTTTTATAGGTAAATATCTTGAGATGTTTAGCAAAAAGTGTGCTTTAGATACCATAGATGGGCTTAATGATTTTT TACAAAATGAAGTTTTAGTTTTCAATGGTAAAGAATTTGTCTCTAAAGAAGTTCAAAAGGTTTGTTTAGGGGATAGAATT TTGCTTAAAACTGGAGATAAAATTTTAATCGATGGGATTTGTAAAAGTGGTGAAATGAGTATGGATACTTCTTCTTTAAA CGGAGAAAGTATTCCAAAACTCATACAAAAAGAAGATGAAATTTTTTCAGCTTGTATAGTGCTTGATGGAAGTGTGGAGT ATGAAGCAACAAAGCTTTACAAGGATTCAAAACTCAGTCAAATTATCCAGCTTTTAGAACTTGCAAGTTCTAAAAAAGCA AAACTTGAAAGTTTGGTCAATAGTCTTTTGGCTTATTTTTCTAGAACGGTTTTATTGATCGCTTTTATTTGTTTTGCTTT TTGGTTTTTTTATAAAGAAGAGAGTTTTGAAATTTCTTTAGTCAATGCGATTGCAGTTTTGATTATCGCTTGTCCTTGTG CTTTGGCTTTAGCAACGCCCGTGAGCAATCTTGTAGCTTTAGGTAGAGCTTTAAAAAAACATATTTTATTTAAAAGTTCT AGCGTGATAGAAGATTTAAGCAAATGTGATTGTGTGGTATTTGATAAAACGGGTATTTTAACCAAAATAGAGCTTGAACT TAAAGAGGTTTTTTTAGATAAAGCGCTTGATTTAAACGAGCTTTATAATTTTGTAAAACTTTCTAAACATCCTATCTCTC AAAATATTGTGTTATATTTAAAGCAAAAAGGAGCTAAGGATTTAAATTTGGATTTTAAAAAGCATTCGAGTATTCAAGCT AAAGGTTTAAGTGCTGAGTTAAATGAAGGGTTGCTTTTAGGCGGAAGTTCTAAATTTTTGCAAGAAAAGGGTATTGTGGC TAAAGAATTTGATAATACGCATTTTATTTTTGCCAAGGAAGGTAAAATTTTAGCTTTTTTTGAGTTTGATAGTGTTTTAA GAGAAGGTGCAAAAGAGCTTATCGCTTATCTTAAAAAAGAAAAGAAAGAATTAATGATACTCAGTGGCGATCATCAAAAA GCAGTGGAAAAAATCGCTAAAAAGTTAGAAATTCAAAATTATCAAGCTTCTTGTTTGCCTGAAGATAAGATGAAAACTAT AGAAAATTTAAGTAAAAATTACAAAGTTTTATTTGTAGGTGATGGGGTAAATGATGCACTAGCTTTAAAATACGCAAGTG TTTCAATGACTTTAAGAGAAGGAAGTGATCTAGCTATAGAAAGTAGTGATGTTTTGCTTTTGAAAAATGACTTGCTTTCT TTAAAAAAAGCCATCAAATTATCTAAAAACACCTTTAAAATTATCAAGCAAAATCTTGCTTTTTCTTTGTTTTATAATGC TTGCACCATACCTTTGGCTTTTTTGGGTATGATAAATCCTTTATTTGCTGCTATTTCTATGTCTTTTAGTAGTATAATAG TCGTTTTAAATGCTTTAAGGATTAAAGAATGA
Upstream 100 bases:
>100_bases TTTAGCAGAATAATTTTTGTAAAATGTGATTTTAATAAAAAAATGCACTTTTTGTCAAATTTGTTTATAATTATAAAAAA TATTTTTTTAAAGAATGATT
Downstream 100 bases:
>100_bases ATAGTATAATCATGATGATGATAGGAGTTTCTATCTTAGCGTTTTTTATCATTTTGGCAACTTTGCTTTGGGGGATTAAA AATAAGCAATTTGATGATGA
Product: ATPase P
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 783; Mature: 783
Protein sequence:
>783_residues MKCEHCKLDYKQAQMIEYKGKFFCCKGCKSVWEILHESGLDEFYEKLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYL MIHGIECAACVWLNEKILTKQEGILELDINHLNHKARIVFDEQSISLVQILRLIESIGYKASAYDASKASKKADLLKREF YSKLVVAIACVMNIMWIAVAKYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHFYKSAFKTLKMHSLNMDVLVISGAS LAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKYLEMFSKKCALDTIDGLNDFLQNEVLVFNGKEFVSKEVQKVCLGDRI LLKTGDKILIDGICKSGEMSMDTSSLNGESIPKLIQKEDEIFSACIVLDGSVEYEATKLYKDSKLSQIIQLLELASSKKA KLESLVNSLLAYFSRTVLLIAFICFAFWFFYKEESFEISLVNAIAVLIIACPCALALATPVSNLVALGRALKKHILFKSS SVIEDLSKCDCVVFDKTGILTKIELELKEVFLDKALDLNELYNFVKLSKHPISQNIVLYLKQKGAKDLNLDFKKHSSIQA KGLSAELNEGLLLGGSSKFLQEKGIVAKEFDNTHFIFAKEGKILAFFEFDSVLREGAKELIAYLKKEKKELMILSGDHQK AVEKIAKKLEIQNYQASCLPEDKMKTIENLSKNYKVLFVGDGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLS LKKAIKLSKNTFKIIKQNLAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALRIKE
Sequences:
>Translated_783_residues MKCEHCKLDYKQAQMIEYKGKFFCCKGCKSVWEILHESGLDEFYEKLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYL MIHGIECAACVWLNEKILTKQEGILELDINHLNHKARIVFDEQSISLVQILRLIESIGYKASAYDASKASKKADLLKREF YSKLVVAIACVMNIMWIAVAKYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHFYKSAFKTLKMHSLNMDVLVISGAS LAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKYLEMFSKKCALDTIDGLNDFLQNEVLVFNGKEFVSKEVQKVCLGDRI LLKTGDKILIDGICKSGEMSMDTSSLNGESIPKLIQKEDEIFSACIVLDGSVEYEATKLYKDSKLSQIIQLLELASSKKA KLESLVNSLLAYFSRTVLLIAFICFAFWFFYKEESFEISLVNAIAVLIIACPCALALATPVSNLVALGRALKKHILFKSS SVIEDLSKCDCVVFDKTGILTKIELELKEVFLDKALDLNELYNFVKLSKHPISQNIVLYLKQKGAKDLNLDFKKHSSIQA KGLSAELNEGLLLGGSSKFLQEKGIVAKEFDNTHFIFAKEGKILAFFEFDSVLREGAKELIAYLKKEKKELMILSGDHQK AVEKIAKKLEIQNYQASCLPEDKMKTIENLSKNYKVLFVGDGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLS LKKAIKLSKNTFKIIKQNLAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALRIKE >Mature_783_residues MKCEHCKLDYKQAQMIEYKGKFFCCKGCKSVWEILHESGLDEFYEKLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYL MIHGIECAACVWLNEKILTKQEGILELDINHLNHKARIVFDEQSISLVQILRLIESIGYKASAYDASKASKKADLLKREF YSKLVVAIACVMNIMWIAVAKYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHFYKSAFKTLKMHSLNMDVLVISGAS LAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKYLEMFSKKCALDTIDGLNDFLQNEVLVFNGKEFVSKEVQKVCLGDRI LLKTGDKILIDGICKSGEMSMDTSSLNGESIPKLIQKEDEIFSACIVLDGSVEYEATKLYKDSKLSQIIQLLELASSKKA KLESLVNSLLAYFSRTVLLIAFICFAFWFFYKEESFEISLVNAIAVLIIACPCALALATPVSNLVALGRALKKHILFKSS SVIEDLSKCDCVVFDKTGILTKIELELKEVFLDKALDLNELYNFVKLSKHPISQNIVLYLKQKGAKDLNLDFKKHSSIQA KGLSAELNEGLLLGGSSKFLQEKGIVAKEFDNTHFIFAKEGKILAFFEFDSVLREGAKELIAYLKKEKKELMILSGDHQK AVEKIAKKLEIQNYQASCLPEDKMKTIENLSKNYKVLFVGDGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLS LKKAIKLSKNTFKIIKQNLAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALRIKE
Specific function: Involved in copper export [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=775, Percent_Identity=28.5161290322581, Blast_Score=273, Evalue=6e-73, Organism=Homo sapiens, GI115529486, Length=544, Percent_Identity=27.2058823529412, Blast_Score=189, Evalue=1e-47, Organism=Homo sapiens, GI55743073, Length=811, Percent_Identity=24.2909987669544, Blast_Score=184, Evalue=4e-46, Organism=Homo sapiens, GI48762687, Length=220, Percent_Identity=25, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI48762685, Length=220, Percent_Identity=25, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI48762691, Length=220, Percent_Identity=25, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI48762689, Length=220, Percent_Identity=25, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1786691, Length=829, Percent_Identity=28.4680337756333, Blast_Score=318, Evalue=7e-88, Organism=Escherichia coli, GI1789879, Length=710, Percent_Identity=23.6619718309859, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI1786914, Length=458, Percent_Identity=22.4890829694323, Blast_Score=99, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17556548, Length=521, Percent_Identity=26.679462571977, Blast_Score=168, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6320475, Length=757, Percent_Identity=27.6089828269485, Blast_Score=240, Evalue=6e-64, Organism=Saccharomyces cerevisiae, GI6319772, Length=622, Percent_Identity=26.6881028938907, Blast_Score=216, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6321430, Length=243, Percent_Identity=25.5144032921811, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321271, Length=143, Percent_Identity=32.8671328671329, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6325221, Length=243, Percent_Identity=25.1028806584362, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI221329854, Length=556, Percent_Identity=26.2589928057554, Blast_Score=170, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR000695 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 88166; Mature: 88166
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCEHCKLDYKQAQMIEYKGKFFCCKGCKSVWEILHESGLDEFYEKLGNQTLSPVNFQNE CCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHH MKNYDEFITKTKEGFSEIYLMIHGIECAACVWLNEKILTKQEGILELDINHLNHKARIVF HHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECHHHHHCCCCEEEEEHHHCCCEEEEEE DEQSISLVQILRLIESIGYKASAYDASKASKKADLLKREFYSKLVVAIACVMNIMWIAVA CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHFYKSAFKTLKMHSLNMDVLVISGAS HHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCH LAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKYLEMFSKKCALDTIDGLNDFLQNEVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEE FNGKEFVSKEVQKVCLGDRILLKTGDKILIDGICKSGEMSMDTSSLNGESIPKLIQKEDE ECCHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH IFSACIVLDGSVEYEATKLYKDSKLSQIIQLLELASSKKAKLESLVNSLLAYFSRTVLLI HHEEHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AFICFAFWFFYKEESFEISLVNAIAVLIIACPCALALATPVSNLVALGRALKKHILFKSS HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SVIEDLSKCDCVVFDKTGILTKIELELKEVFLDKALDLNELYNFVKLSKHPISQNIVLYL HHHHHHHHCCEEEEECCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEE KQKGAKDLNLDFKKHSSIQAKGLSAELNEGLLLGGSSKFLQEKGIVAKEFDNTHFIFAKE ECCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCEEEECCCCEEEEEEC GKILAFFEFDSVLREGAKELIAYLKKEKKELMILSGDHQKAVEKIAKKLEIQNYQASCLP CCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCC EDKMKTIENLSKNYKVLFVGDGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLS HHHHHHHHHHCCCCEEEEEECCCCCHHHEEEHHEEEEEECCCCCEEECCCEEEEHHHHHH LKKAIKLSKNTFKIIKQNLAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALR HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKE CCC >Mature Secondary Structure MKCEHCKLDYKQAQMIEYKGKFFCCKGCKSVWEILHESGLDEFYEKLGNQTLSPVNFQNE CCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHH MKNYDEFITKTKEGFSEIYLMIHGIECAACVWLNEKILTKQEGILELDINHLNHKARIVF HHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECHHHHHCCCCEEEEEHHHCCCEEEEEE DEQSISLVQILRLIESIGYKASAYDASKASKKADLLKREFYSKLVVAIACVMNIMWIAVA CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHFYKSAFKTLKMHSLNMDVLVISGAS HHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCH LAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKYLEMFSKKCALDTIDGLNDFLQNEVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEE FNGKEFVSKEVQKVCLGDRILLKTGDKILIDGICKSGEMSMDTSSLNGESIPKLIQKEDE ECCHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH IFSACIVLDGSVEYEATKLYKDSKLSQIIQLLELASSKKAKLESLVNSLLAYFSRTVLLI HHEEHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AFICFAFWFFYKEESFEISLVNAIAVLIIACPCALALATPVSNLVALGRALKKHILFKSS HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SVIEDLSKCDCVVFDKTGILTKIELELKEVFLDKALDLNELYNFVKLSKHPISQNIVLYL HHHHHHHHCCEEEEECCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEE KQKGAKDLNLDFKKHSSIQAKGLSAELNEGLLLGGSSKFLQEKGIVAKEFDNTHFIFAKE ECCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCEEEECCCCEEEEEEC GKILAFFEFDSVLREGAKELIAYLKKEKKELMILSGDHQKAVEKIAKKLEIQNYQASCLP CCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCC EDKMKTIENLSKNYKVLFVGDGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLS HHHHHHHHHHCCCCEEEEEECCCCCHHHEEEHHEEEEEECCCCCEEECCCEEEEHHHHHH LKKAIKLSKNTFKIIKQNLAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALR HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA