| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is pglA [H]
Identifier: 57238006
GI number: 57238006
Start: 1182582
End: 1183712
Strand: Reverse
Name: pglA [H]
Synonym: CJE1267
Alternate gene names: 57238006
Gene position: 1183712-1182582 (Counterclockwise)
Preceding gene: 57238007
Following gene: 57238005
Centisome position: 66.58
GC content: 30.15
Gene sequence:
>1131_bases ATGAGAATAGGATTTTTATCACATGCAGGAGCAAGTATTTATCATTTTAGAATGCCTATTATAAAAGCATTAAAAGATAG AAAAGATGAAGTTTTTGTTATAGTGCCACAAGATGAATACACGCAAAAACTTAGAGAACTTGGTTTACAAGTAATTGTTT ATGAGTTTTCAAGAGCTAGTTTAAATCCTTTTGTGGTTTTAAAGAATTTTTTTTATCTTGCTAAGGTTTTGAAAAATTTA AATCTTGATCTTATTCAAAGTGCAGCACATAAAAGCAATACCTTTGGAATTTTAGCAGCAAAATGGGCAAAAATTCCTTA TCGTTTTGCTTTGGTAGAAGGCTTAGGATCTTTTTATATAGATCAAGGTTTTAAGGCAAATTTAGTGCGTTTTGTTATTA ATAATCTTTATAAATTAAGTTTTAAATTTGCACACCAGTTTATTTTTGTCAATGAAAGTAATGCTGAGTTTATGCGGAAT TTAGGACTTAAAGAAAATAAAATTTGCGTGATAAAATCTGTAGGGATCAATTTAAAAAAATTTTTTCCTATTTATGTAGA ATCGGAAAAAAAAGAGCTTTTTTGGAAAAATTTAAACATAGATAAAAAACCCATTGTACTTATGATAGCAAGAGCTTTAT GGCATAAAGGTGTAAAAGAATTTTATGAAAGTGCTACTATGCTAAAAGACAAAGCAAAATTTGTTTTAGTTGGTGGAAGA GATGAAAATCCTTCTTGTGCGAGTTTGGAGTTTTTAAACTCTGGCGCAGTGCATTATTTGGGTGCTAGAAGTGATATCGT AGAACTTTTGCAAAATTGTGATATTTTTGTTTTGCCAAGCTATAAAGAAGGCTTTCCTGTAAGTGTTTTGGAGGCAAAAG CTTGTGGTAAGGCTATAGTGGTGAGCGATTGTGAAGGTTGTGTAGAGGCTATTTCTAATGCTTATGATGGACTTTGGGCA AAAACAAAAAATGCTAAGGATTTAAGCGAAAAAATTTCACTTTTATTAGAAGATGAAAAATTAAGATTAAATTTAGCTAA AAATGCCGCCCAAGATGCTTTGCAATACGATGAAAATAATATCGCACAGCGTTATTTAAAACTTTATGATAGGGTAATTA AGAATGTATGA
Upstream 100 bases:
>100_bases GCAAATGTTTTTTTTAGGAAATTATGATAAGAATTTATTTGACTTGGTGATTAATTCTAGAGATGCTAAGGTTTTTAAAC TTAAAATTTAAGGGTTGAAA
Downstream 100 bases:
>100_bases AAAAGTTTTTAAAAGAATTTTTGATTTTATTTTAGCTTTAGTGTTTTTAGTACTCTTTTCTCCGGTGATTTTAATCACTG CTTTACTTTTAAAAATCACT
Product: general glycosylation pathway protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKLRELGLQVIVYEFSRASLNPFVVLKNFFYLAKVLKNL NLDLIQSAAHKSNTFGILAAKWAKIPYRFALVEGLGSFYIDQGFKANLVRFVINNLYKLSFKFAHQFIFVNESNAEFMRN LGLKENKICVIKSVGINLKKFFPIYVESEKKELFWKNLNIDKKPIVLMIARALWHKGVKEFYESATMLKDKAKFVLVGGR DENPSCASLEFLNSGAVHYLGARSDIVELLQNCDIFVLPSYKEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWA KTKNAKDLSEKISLLLEDEKLRLNLAKNAAQDALQYDENNIAQRYLKLYDRVIKNV
Sequences:
>Translated_376_residues MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKLRELGLQVIVYEFSRASLNPFVVLKNFFYLAKVLKNL NLDLIQSAAHKSNTFGILAAKWAKIPYRFALVEGLGSFYIDQGFKANLVRFVINNLYKLSFKFAHQFIFVNESNAEFMRN LGLKENKICVIKSVGINLKKFFPIYVESEKKELFWKNLNIDKKPIVLMIARALWHKGVKEFYESATMLKDKAKFVLVGGR DENPSCASLEFLNSGAVHYLGARSDIVELLQNCDIFVLPSYKEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWA KTKNAKDLSEKISLLLEDEKLRLNLAKNAAQDALQYDENNIAQRYLKLYDRVIKNV >Mature_376_residues MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKLRELGLQVIVYEFSRASLNPFVVLKNFFYLAKVLKNL NLDLIQSAAHKSNTFGILAAKWAKIPYRFALVEGLGSFYIDQGFKANLVRFVINNLYKLSFKFAHQFIFVNESNAEFMRN LGLKENKICVIKSVGINLKKFFPIYVESEKKELFWKNLNIDKKPIVLMIARALWHKGVKEFYESATMLKDKAKFVLVGGR DENPSCASLEFLNSGAVHYLGARSDIVELLQNCDIFVLPSYKEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWA KTKNAKDLSEKISLLLEDEKLRLNLAKNAAQDALQYDENNIAQRYLKLYDRVIKNV
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 42838; Mature: 42838
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKLRELGLQVIVYEFSRAS CEEECCCCCCCCEEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCC LNPFVVLKNFFYLAKVLKNLNLDLIQSAAHKSNTFGILAAKWAKIPYRFALVEGLGSFYI CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHH DQGFKANLVRFVINNLYKLSFKFAHQFIFVNESNAEFMRNLGLKENKICVIKSVGINLKK CCCCHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHCCCCCCCEEEEEECCCCHHH FFPIYVESEKKELFWKNLNIDKKPIVLMIARALWHKGVKEFYESATMLKDKAKFVLVGGR EEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC DENPSCASLEFLNSGAVHYLGARSDIVELLQNCDIFVLPSYKEGFPVSVLEAKACGKAIV CCCCCCHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEECCCCCCCCCHHEEHHHCCCEEE VSDCEGCVEAISNAYDGLWAKTKNAKDLSEKISLLLEDEKLRLNLAKNAAQDALQYDENN EECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHCCCHH IAQRYLKLYDRVIKNV HHHHHHHHHHHHHHCC >Mature Secondary Structure MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKLRELGLQVIVYEFSRAS CEEECCCCCCCCEEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCC LNPFVVLKNFFYLAKVLKNLNLDLIQSAAHKSNTFGILAAKWAKIPYRFALVEGLGSFYI CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHH DQGFKANLVRFVINNLYKLSFKFAHQFIFVNESNAEFMRNLGLKENKICVIKSVGINLKK CCCCHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHCCCCCCCEEEEEECCCCHHH FFPIYVESEKKELFWKNLNIDKKPIVLMIARALWHKGVKEFYESATMLKDKAKFVLVGGR EEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC DENPSCASLEFLNSGAVHYLGARSDIVELLQNCDIFVLPSYKEGFPVSVLEAKACGKAIV CCCCCCHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEECCCCCCCCCHHEEHHHCCCEEE VSDCEGCVEAISNAYDGLWAKTKNAKDLSEKISLLLEDEKLRLNLAKNAAQDALQYDENN EECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHCCCHH IAQRYLKLYDRVIKNV HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]