| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is pssA [H]
Identifier: 57237996
GI number: 57237996
Start: 1172819
End: 1173547
Strand: Reverse
Name: pssA [H]
Synonym: CJE1257
Alternate gene names: 57237996
Gene position: 1173547-1172819 (Counterclockwise)
Preceding gene: 57237997
Following gene: 57237994
Centisome position: 66.01
GC content: 31.55
Gene sequence:
>729_bases ATGAATAACAGACCGCAACTAATTTATATTTTACCCAATCTTTTTACAGCTGCTTCAGCTTTTTTAGGGGTTATTTCTAT TATAGCTTCAATACATGGAAATTATTATACAGCTTTGATTTATATTATTTTATCTTTGATTTGCGATGGGCTTGATGGCC GTGTTGCAAGACTTACAAATTCTACTTCAAAATTTGGGGTAGAATTTGATTCTTTGGCTGATCTAGTAGCTTTTGGAGTT GCTCCAGCGGTTCTTTTTTATATGGCTATAGGTTATGATTTTGGAAAACTTGGATCTTTGATTACAGCTTTTTTTGTGGT TTTTGGAGCTATTCGTTTGGCGAGATTTAATGTTACCACAGGCACTTATGAACCCTCCGTTTTTATAGGTCTTCCTATAC CTACGGCAGCAGTTGTGAGTGCTATATGGACTTATGCGTTTATCAGTTATGATTTTTTAAAGCCTTATGGCGTAGTTTTT TTGGTGCTTCAAGCAATTTTAGGGCTTTTAATGGTAAGTAATATACGTTATCCTAGTTTTAAAAAGCTTGATTTTAATCG TTCTAGTGTTTTAAAAGTTTTGATTATTTTAATTATAATATTTTCATTTTTATATCTTTACCCTCTTGAAAGTTTAGTAA TTTTAGCAAGCTTGTATGTGCTTTATGGCATTATTCGGGTTTTATATACCATTATCGTTTCAAAATTTAAGATAAGAAAT CAAGAGTAA
Upstream 100 bases:
>100_bases TATAAGTTTACTTTTACCAAAAGATACTAGAATTCATATAGGCTTAAATGATGAAATTAAAGCAGGTTCATTGCTAGGCT ATTTTGCGTAAGGAAAAATA
Downstream 100 bases:
>100_bases AATTTTTCAATGACTTCGCATTCTTCTTGAGTGAAGCCAGCTTTGATTCTTGCTTGAATGTTAAGTTTTTTTCCCGCAAG AGAGAATTGTTTAAACGTTT
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIILSLICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGV APAVLFYMAIGYDFGKLGSLITAFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGVVF LVLQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASLYVLYGIIRVLYTIIVSKFKIRN QE
Sequences:
>Translated_242_residues MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIILSLICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGV APAVLFYMAIGYDFGKLGSLITAFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGVVF LVLQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASLYVLYGIIRVLYTIIVSKFKIRN QE >Mature_242_residues MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIILSLICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGV APAVLFYMAIGYDFGKLGSLITAFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGVVF LVLQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASLYVLYGIIRVLYTIIVSKFKIRN QE
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=105, Percent_Identity=49.5238095238095, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 26898; Mature: 26898
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIILSLICDGLDGRVARLTN CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHC STSKFGVEFDSLADLVAFGVAPAVLFYMAIGYDFGKLGSLITAFFVVFGAIRLARFNVTT CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCC GTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGVVFLVLQAILGLLMVSNIRYPSF CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASLYVLYGIIRVLYTIIVSKFKIRN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QE CC >Mature Secondary Structure MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIILSLICDGLDGRVARLTN CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHC STSKFGVEFDSLADLVAFGVAPAVLFYMAIGYDFGKLGSLITAFFVVFGAIRLARFNVTT CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCC GTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGVVFLVLQAILGLLMVSNIRYPSF CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASLYVLYGIIRVLYTIIVSKFKIRN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]