| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is sstT [H]
Identifier: 57237979
GI number: 57237979
Start: 1157301
End: 1158524
Strand: Direct
Name: sstT [H]
Synonym: CJE1240
Alternate gene names: 57237979
Gene position: 1157301-1158524 (Clockwise)
Preceding gene: 57237977
Following gene: 57237980
Centisome position: 65.1
GC content: 32.35
Gene sequence:
>1224_bases ATGTTTTCTAAAATCATTCAAAGCTACGCTAAAGGCAACCTCATAGTTCAAATTTGCATAGGTATAGCACTAGGAATACT TATAGGCATTAGCTCTAAAGAAATATCTGAAATTGCAAATTTACTTGGAATACTTTTTACAAGTGCCTTAAAAGCTATCG CTCCTATGCTTGTTTTTATTTTAATTTTAACCTCAATTTGCACTAAAGATTTTTCTCAAAGTGGTGCTAAGATCAAAAAT ATTATCATTTTATATATAGTAGGCACCTTTTTTGCTTCAGCTTGTGCAGTTCTTGCTAATTTTTTCTTCCCTGTAAAGCT TGTTTTAGATGGAGTTCAAACTGCTACAAACTCATCTCCAACCCACATGAGTGATATTTTCAAAGATCTTTTATTTAAAA TTGTCGATAATCCCATAAATGCTCTTTCAAGCGGAAATTATTTAGGAATTTTAACTTGGGCAATAGCTGGAGGTATAGCA TTAAAACACTGTTCTAACGAAGCAAAACAAGTTTTTATAGATATCAATGAAGGGGTTTTAAAAATCGTTAAATTTGTAGT AAAACTTGCCCCTTTTGGAATTTTTGGACTTGTGGCTAATTCTGTAGCACAAACAGGAGCACAAGGTTTGCTAAGTTATG TAAAACTTTTAATTTTACTTGTAGCTACTATGCTTTTTGTTACTTTTGTTATCAATGCCTTAATAGTCTTTTTTTATACA AGAAAAAATCCTTTTCCTTTAATTTTTATCTGCTTAAGGCACAGTGCATTTTTTGCCTTTTTTACAAGAAGTTCAGCGGC AAATATTCCTGTAAATATGGCACTTTGCGCTAAACTTGGCATAGATAAAGAATTTTATGGCATTTCTATACCTTTAGGAG CTACTATCAACATGGCAGGAGCAGCAGTTACTATAGCTATTTTAAGTCTTACTGCAGCCAATACCGTTGGTATAGAAATC AGTCTTTTACAAGCCTTTTTATTAAGCATTATTGCCACCTTTGCAGCTTGTGGGGCTAGCGGAGTTGCGGGCGGATCTTT ACTGCTTATACCTTTGGCTTGTTCTTTATTTAATATAGACTATGATATTGCTATGAAGGTAGTTGCCATAGGTTTTATTA TAGGGGTTATTCAAGATAGTGTTGAAACTGCTTTAAATAGTTCTACAGATGTTCTTTTTACAGCAATTTGTTCTAAAAAT GAATTAAATTACAATATCAAATAA
Upstream 100 bases:
>100_bases AAATAAACTTATCAAAGCTTGATAAATTAAAAATTCTCTAAAATTAAGCAAAAGTTAGTTAAAATCAACTTTTGATATAA AAAATATTTAAAAGGTTTTT
Downstream 100 bases:
>100_bases GGTAAAAACATGCGTCATCTCATCACTACAAAGGATTTTAATAAAGTCGAAATTATGGAGCTTTTTAAAGAAGCAAGTGA TTTCTTAGATGAAAAACCTA
Product: serine/threonine transporter SstT
Products: NA
Alternate protein names: Na(+)/serine-threonine symporter [H]
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MFSKIIQSYAKGNLIVQICIGIALGILIGISSKEISEIANLLGILFTSALKAIAPMLVFILILTSICTKDFSQSGAKIKN IIILYIVGTFFASACAVLANFFFPVKLVLDGVQTATNSSPTHMSDIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIA LKHCSNEAKQVFIDINEGVLKIVKFVVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLILLVATMLFVTFVINALIVFFYT RKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALCAKLGIDKEFYGISIPLGATINMAGAAVTIAILSLTAANTVGIEI SLLQAFLLSIIATFAACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVLFTAICSKN ELNYNIK
Sequences:
>Translated_407_residues MFSKIIQSYAKGNLIVQICIGIALGILIGISSKEISEIANLLGILFTSALKAIAPMLVFILILTSICTKDFSQSGAKIKN IIILYIVGTFFASACAVLANFFFPVKLVLDGVQTATNSSPTHMSDIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIA LKHCSNEAKQVFIDINEGVLKIVKFVVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLILLVATMLFVTFVINALIVFFYT RKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALCAKLGIDKEFYGISIPLGATINMAGAAVTIAILSLTAANTVGIEI SLLQAFLLSIIATFAACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVLFTAICSKN ELNYNIK >Mature_407_residues MFSKIIQSYAKGNLIVQICIGIALGILIGISSKEISEIANLLGILFTSALKAIAPMLVFILILTSICTKDFSQSGAKIKN IIILYIVGTFFASACAVLANFFFPVKLVLDGVQTATNSSPTHMSDIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIA LKHCSNEAKQVFIDINEGVLKIVKFVVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLILLVATMLFVTFVINALIVFFYT RKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALCAKLGIDKEFYGISIPLGATINMAGAAVTIAILSLTAANTVGIEI SLLQAFLLSIIATFAACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVLFTAICSKN ELNYNIK
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) [H]
COG id: COG3633
COG function: function code E; Na+/serine symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI4827012, Length=276, Percent_Identity=27.1739130434783, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI21314632, Length=318, Percent_Identity=27.9874213836478, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI223468564, Length=255, Percent_Identity=27.843137254902, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI169790839, Length=268, Percent_Identity=26.1194029850746, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI223468566, Length=255, Percent_Identity=27.843137254902, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI66773030, Length=268, Percent_Identity=27.2388059701493, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI5032093, Length=304, Percent_Identity=27.3026315789474, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI40254478, Length=274, Percent_Identity=30.2919708029197, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI194239697, Length=315, Percent_Identity=27.9365079365079, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI1789473, Length=397, Percent_Identity=52.896725440806, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI1789947, Length=382, Percent_Identity=24.0837696335079, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790514, Length=429, Percent_Identity=24.2424242424242, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788024, Length=333, Percent_Identity=28.5285285285285, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193206505, Length=436, Percent_Identity=24.7706422018349, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71983106, Length=277, Percent_Identity=28.158844765343, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71983099, Length=277, Percent_Identity=28.158844765343, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17537407, Length=454, Percent_Identity=24.6696035242291, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71996953, Length=293, Percent_Identity=23.5494880546075, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193206654, Length=447, Percent_Identity=24.6085011185682, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI24583025, Length=269, Percent_Identity=26.7657992565056, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI17137668, Length=269, Percent_Identity=26.7657992565056, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24583023, Length=269, Percent_Identity=26.7657992565056, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR023025 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43270; Mature: 43270
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKIIQSYAKGNLIVQICIGIALGILIGISSKEISEIANLLGILFTSALKAIAPMLVFI CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILTSICTKDFSQSGAKIKNIIILYIVGTFFASACAVLANFFFPVKLVLDGVQTATNSSP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC THMSDIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIALKHCSNEAKQVFIDINEGVL CHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCHHHHHCCCCHHEEEEECCHHHH KIVKFVVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLILLVATMLFVTFVINALIVFFYT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALCAKLGIDKEFYGISIPLGATINMAG CCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCEEHHH AAVTIAILSLTAANTVGIEISLLQAFLLSIIATFAACGASGVAGGSLLLIPLACSLFNID HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC YDIAMKVVAIGFIIGVIQDSVETALNSSTDVLFTAICSKNELNYNIK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFSKIIQSYAKGNLIVQICIGIALGILIGISSKEISEIANLLGILFTSALKAIAPMLVFI CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILTSICTKDFSQSGAKIKNIIILYIVGTFFASACAVLANFFFPVKLVLDGVQTATNSSP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC THMSDIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIALKHCSNEAKQVFIDINEGVL CHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCHHHHHCCCCHHEEEEECCHHHH KIVKFVVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLILLVATMLFVTFVINALIVFFYT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALCAKLGIDKEFYGISIPLGATINMAG CCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCEEHHH AAVTIAILSLTAANTVGIEISLLQAFLLSIIATFAACGASGVAGGSLLLIPLACSLFNID HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC YDIAMKVVAIGFIIGVIQDSVETALNSSTDVLFTAICSKNELNYNIK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA