| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237880
Identifier: 57237880
GI number: 57237880
Start: 1049927
End: 1050673
Strand: Direct
Name: 57237880
Synonym: CJE1136
Alternate gene names: NA
Gene position: 1049927-1050673 (Clockwise)
Preceding gene: 57237879
Following gene: 57237881
Centisome position: 59.06
GC content: 28.51
Gene sequence:
>747_bases ATGAAATATAGGTATATAAAATGGGATGAAAACGAAAAGTGTGCTATTTTTTTTCCTGATATAGATTTTGATATATGGAA AAAAACCCAGCTTTTAGAGAATGATTATGCTAATCCAACTTTAATTATATCATCTCATTTAAAAGATAAGGTCGGTATTT TAGAACTATTTGAATATTATATTTTGCTTATTTGTGGAAAAAGCATGGGTGTCTCAAGGTGGGAATGTAATAATTTAATT TTATTAGATACTTACAGCATCGATAATATTAGCAGTCCATTTTATTTAAATACACCCAAACCTACCTATATAAGTGAATA TATTAATGTCTTGGGGCAACTTTTTCTAGCAGGTTATATAGATTTTGGATCTTATTGTGATGAAGATAGAAATAAAATAG ATTATCCCTCAAACTTATCTTATTATAAAGAAGATAAATATCAAGCTTGGATATATTTTAGAGATAATTTCTTTTATCAA GACAAATTTATTAGAGATTTGGACGATCCTGAAACATTAGACGAGGGTGGATATAGTCTTATTTTAAATGATGTTTCTTG GGATACACCACAATATTGGTCACAATACAATATCTGGATAGCAACAACCCCAAAAGGCACAAAATACTTCCAAGAAATCT TAGCTCCTAAATTTTACAACAAATACAAAGATTTAGAAGTAGAGATTGATGATAAGGGTAATGTGCTTAGATGGATAGGA GAGATTAATAGAGACAAAAAATATTAG
Upstream 100 bases:
>100_bases TATAAGAAAACTTCTAAAAGCGGGGGTGAGACCATAGAGATAAATTCCAATAAGCCAAGAGGAAATCTTAAAACAATACA TATAGAAAATGGGATAAAAA
Downstream 100 bases:
>100_bases CAAATAAAAAATGATATAATAATGCTTTATATAAGGAATCTTTTATGTTTATAAGTTCTAAAACAGAGTTAATTCAAACT ATTAAAAATTTAATAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKYRYIKWDENEKCAIFFPDIDFDIWKKTQLLENDYANPTLIISSHLKDKVGILELFEYYILLICGKSMGVSRWECNNLI LLDTYSIDNISSPFYLNTPKPTYISEYINVLGQLFLAGYIDFGSYCDEDRNKIDYPSNLSYYKEDKYQAWIYFRDNFFYQ DKFIRDLDDPETLDEGGYSLILNDVSWDTPQYWSQYNIWIATTPKGTKYFQEILAPKFYNKYKDLEVEIDDKGNVLRWIG EINRDKKY
Sequences:
>Translated_248_residues MKYRYIKWDENEKCAIFFPDIDFDIWKKTQLLENDYANPTLIISSHLKDKVGILELFEYYILLICGKSMGVSRWECNNLI LLDTYSIDNISSPFYLNTPKPTYISEYINVLGQLFLAGYIDFGSYCDEDRNKIDYPSNLSYYKEDKYQAWIYFRDNFFYQ DKFIRDLDDPETLDEGGYSLILNDVSWDTPQYWSQYNIWIATTPKGTKYFQEILAPKFYNKYKDLEVEIDDKGNVLRWIG EINRDKKY >Mature_248_residues MKYRYIKWDENEKCAIFFPDIDFDIWKKTQLLENDYANPTLIISSHLKDKVGILELFEYYILLICGKSMGVSRWECNNLI LLDTYSIDNISSPFYLNTPKPTYISEYINVLGQLFLAGYIDFGSYCDEDRNKIDYPSNLSYYKEDKYQAWIYFRDNFFYQ DKFIRDLDDPETLDEGGYSLILNDVSWDTPQYWSQYNIWIATTPKGTKYFQEILAPKFYNKYKDLEVEIDDKGNVLRWIG EINRDKKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29753; Mature: 29753
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYRYIKWDENEKCAIFFPDIDFDIWKKTQLLENDYANPTLIISSHLKDKVGILELFEYY CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHH ILLICGKSMGVSRWECNNLILLDTYSIDNISSPFYLNTPKPTYISEYINVLGQLFLAGYI HHHHCCCCCCCCEEECCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH DFGSYCDEDRNKIDYPSNLSYYKEDKYQAWIYFRDNFFYQDKFIRDLDDPETLDEGGYSL HCCHHCCCCCCCCCCCCCCCCEECCCEEEEEEEECCEEECCHHHHCCCCCCHHCCCCEEE ILNDVSWDTPQYWSQYNIWIATTPKGTKYFQEILAPKFYNKYKDLEVEIDDKGNVLRWIG EEECCCCCCCHHHCEEEEEEEECCCCHHHHHHHHCHHHHCCCCCEEEEECCCCCEEHHHH EINRDKKY HCCCCCCC >Mature Secondary Structure MKYRYIKWDENEKCAIFFPDIDFDIWKKTQLLENDYANPTLIISSHLKDKVGILELFEYY CCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHH ILLICGKSMGVSRWECNNLILLDTYSIDNISSPFYLNTPKPTYISEYINVLGQLFLAGYI HHHHCCCCCCCCEEECCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH DFGSYCDEDRNKIDYPSNLSYYKEDKYQAWIYFRDNFFYQDKFIRDLDDPETLDEGGYSL HCCHHCCCCCCCCCCCCCCCCEECCCEEEEEEEECCEEECCHHHHCCCCCCHHCCCCEEE ILNDVSWDTPQYWSQYNIWIATTPKGTKYFQEILAPKFYNKYKDLEVEIDDKGNVLRWIG EEECCCCCCCHHHCEEEEEEEECCCCHHHHHHHHCHHHHCCCCCEEEEECCCCCEEHHHH EINRDKKY HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA