| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237879
Identifier: 57237879
GI number: 57237879
Start: 1048069
End: 1049937
Strand: Direct
Name: 57237879
Synonym: CJE1135
Alternate gene names: NA
Gene position: 1048069-1049937 (Clockwise)
Preceding gene: 57237878
Following gene: 57237880
Centisome position: 58.95
GC content: 27.29
Gene sequence:
>1869_bases ATGCCTCTTGAAAAAGTAAAAGAAACAATTTTTGCTTATGATAAAGAAGTGATTGATTGTGAAGTCTTAAGGGCTAAAAA TGTTGATTTAACTCATTCTAAAATTTATTTTCAAGGTATACTCCTTACAGGCTCAAATGAACTTCCTAACAATCCTTTTT ACTTTGGAGAATTAGATCAAGATAATACTATAAAACAAGATACACCTAGTTATTATTTTTCTCCTAAAGATGAAAGCAGT GGTTTAGGAAGACTTAGTATCTTTTATAAAAATGATGAACTTTGTTTGCTTAATTATTCTATATTAGAAAATTCTTTAAA TATCAAATTAGAATGTTTAAGCAAACAAAGCTTAGAGTATAAAGACTTAATTTCAAACACTTTAAAAGAACAAAAAACCA CACAAGTAGATAAAAAACAAGCTATAGCTAAACTTCATGCTCTTTTAGAAAATCAAAACCTAGAATGTATCCATGGAGGT AAAGTCATACTTAAATCAAACAAAGGAAAAACTTTTAAAGATGATGGCGTGCCTATAATGCTAGAAAGTGATTTATTAAA CTCTAGTATAGTAGCTTGTCCTAATACTATAGCAGGTGTAAGTGTTCCTTGTACTAAAGTTGTTAATGTAAAAGGATCCT TATCTCAAAAGAAAGTCAATAATGAATATGTAATCTTACAAGAACTCATCTCAGCTTGTAAAACAGATAAAGGCTTTGCT TTAAAAGTAAGCTTTACTCCTACTAAGTTTAAATTTGATCACAGCTTTGATCCTAAAGAGGGCTTAGGAGAACAAAGTAA AAATCAAATAGAGTTAAAAGAGCCTATAATAAGACTTCATTATAAAAGTGATAGATTTCAAAAAGATAATTTACCTATCT ATAATCTTTTAATCAATAATGAAAAAAAAGAACAAAATAAGGCTTTAAATGAATTTAATATAGATTTAAAAGATTTAAAA GATATAGAGGATATAAATATTCTTAATCAATTCAAACAAGACTTTAGTAAAGATTATGAATTTAAAGAACTAAATCTTAG CTTTGATACTAATTTAATCAAACTTTATTTTATTATCCCAAAAAACATTGCTAAAGTTTATAAAAGTGCTTATAAGGAAT TTAAAAATAAAGATTTAGGAGCAGGGTATTTTACACAGCTACATGAGTATGATAAAATCATCAAAAATGCTTTAGAAGAT AATAAAGAATTAAACGAATATCATTTTAGTTTTTTAACTCCTGCTAAAATGCAAAATTTAAAACTTCAAATCGCACAAGG ACTAGATGAAATCTTAGAAGATGAAGATAGAAAACAAGAGCTTTATGTTTGTAAATTTGTGGTGGTAAATGGGGTTAGTG AAAACAATACTCAAGAAATTATCCCTGATAATGTTATAAGAATACAAACACAAGATGGTAGTGGGGAGTTTATTGAGATA GTATTTCCTAGTCAATTAGAACTCAATGATAAACCTTTGGAAGATGTGAGTTATACATTTGTTCCGGCTTTAAAATTTTT TAAAGATACTGAGTATTTAAAACCCAGAACATTGACTAAAGATGAAGTGTTGCAGATAGTAGATAAACTGCCAAAAAATG TTCGAGATAAACGCAGGAGAATAGTTGAAAATAAAGAGGAATTAGACAAATTATGGAAAAAGTTAACTAAAAATTCTGAA GAGTTTGAAAATAAAGTAGATAAAAAATACGGACAGCCGATTTATATGAGAAAACTAGATGATCAAACTATTATACAATA TAAGAAAACTTCTAAAAGCGGGGGTGAGACCATAGAGATAAATTCCAATAAGCCAAGAGGAAATCTTAAAACAATACATA TAGAAAATGGGATAAAAAATGAAATATAG
Upstream 100 bases:
>100_bases GATAGAAATGAATTTTATTTTAATGTTTTAGCAGGAGAAAAAAGCGATAAATACTGGAGTTTAAGTTATCATAAAATGAC TAAAAATTTAAGGAAAATTC
Downstream 100 bases:
>100_bases GTATATAAAATGGGATGAAAACGAAAAGTGTGCTATTTTTTTTCCTGATATAGATTTTGATATATGGAAAAAAACCCAGC TTTTAGAGAATGATTATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MPLEKVKETIFAYDKEVIDCEVLRAKNVDLTHSKIYFQGILLTGSNELPNNPFYFGELDQDNTIKQDTPSYYFSPKDESS GLGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDKKQAIAKLHALLENQNLECIHGG KVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKKVNNEYVILQELISACKTDKGFA LKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLINNEKKEQNKALNEFNIDLKDLK DIEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKDLGAGYFTQLHEYDKIIKNALED NKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVSENNTQEIIPDNVIRIQTQDGSGEFIEI VFPSQLELNDKPLEDVSYTFVPALKFFKDTEYLKPRTLTKDEVLQIVDKLPKNVRDKRRRIVENKEELDKLWKKLTKNSE EFENKVDKKYGQPIYMRKLDDQTIIQYKKTSKSGGETIEINSNKPRGNLKTIHIENGIKNEI
Sequences:
>Translated_622_residues MPLEKVKETIFAYDKEVIDCEVLRAKNVDLTHSKIYFQGILLTGSNELPNNPFYFGELDQDNTIKQDTPSYYFSPKDESS GLGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDKKQAIAKLHALLENQNLECIHGG KVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKKVNNEYVILQELISACKTDKGFA LKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLINNEKKEQNKALNEFNIDLKDLK DIEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKDLGAGYFTQLHEYDKIIKNALED NKELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVSENNTQEIIPDNVIRIQTQDGSGEFIEI VFPSQLELNDKPLEDVSYTFVPALKFFKDTEYLKPRTLTKDEVLQIVDKLPKNVRDKRRRIVENKEELDKLWKKLTKNSE EFENKVDKKYGQPIYMRKLDDQTIIQYKKTSKSGGETIEINSNKPRGNLKTIHIENGIKNEI >Mature_621_residues PLEKVKETIFAYDKEVIDCEVLRAKNVDLTHSKIYFQGILLTGSNELPNNPFYFGELDQDNTIKQDTPSYYFSPKDESSG LGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDKKQAIAKLHALLENQNLECIHGGK VILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKKVNNEYVILQELISACKTDKGFAL KVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLINNEKKEQNKALNEFNIDLKDLKD IEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAYKEFKNKDLGAGYFTQLHEYDKIIKNALEDN KELNEYHFSFLTPAKMQNLKLQIAQGLDEILEDEDRKQELYVCKFVVVNGVSENNTQEIIPDNVIRIQTQDGSGEFIEIV FPSQLELNDKPLEDVSYTFVPALKFFKDTEYLKPRTLTKDEVLQIVDKLPKNVRDKRRRIVENKEELDKLWKKLTKNSEE FENKVDKKYGQPIYMRKLDDQTIIQYKKTSKSGGETIEINSNKPRGNLKTIHIENGIKNEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71886; Mature: 71755
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLEKVKETIFAYDKEVIDCEVLRAKNVDLTHSKIYFQGILLTGSNELPNNPFYFGELDQ CCHHHHHHHHHHHCCHHHEEEEHEECCCCCEECEEEEEEEEEECCCCCCCCCEEEEECCC DNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEY CCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEEHHHHCCCCCEEEEECCCCCCCH KDLISNTLKEQKTTQVDKKQAIAKLHALLENQNLECIHGGKVILKSNKGKTFKDDGVPIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCCCCCCCEEE LESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKKVNNEYVILQELISACKTDKGFA EECCCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHCCCCEEHHHHHHHHHCCCCCEE LKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLINN EEEEECCCEEEECCCCCCHHCCCCCCCCCEEHHCCEEEEEECCCCCCCCCCCEEEEEECC EKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIP CHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEC KNIAKVYKSAYKEFKNKDLGAGYFTQLHEYDKIIKNALEDNKELNEYHFSFLTPAKMQNL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECHHHHHHH KLQIAQGLDEILEDEDRKQELYVCKFVVVNGVSENNTQEIIPDNVIRIQTQDGSGEFIEI HHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEE VFPSQLELNDKPLEDVSYTFVPALKFFKDTEYLKPRTLTKDEVLQIVDKLPKNVRDKRRR EECCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH IVENKEELDKLWKKLTKNSEEFENKVDKKYGQPIYMRKLDDQTIIQYKKTSKSGGETIEI HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCEEEE NSNKPRGNLKTIHIENGIKNEI CCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure PLEKVKETIFAYDKEVIDCEVLRAKNVDLTHSKIYFQGILLTGSNELPNNPFYFGELDQ CHHHHHHHHHHHCCHHHEEEEHEECCCCCEECEEEEEEEEEECCCCCCCCCEEEEECCC DNTIKQDTPSYYFSPKDESSGLGRLSIFYKNDELCLLNYSILENSLNIKLECLSKQSLEY CCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEEEHHHHCCCCCEEEEECCCCCCCH KDLISNTLKEQKTTQVDKKQAIAKLHALLENQNLECIHGGKVILKSNKGKTFKDDGVPIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCCCCCCCEEE LESDLLNSSIVACPNTIAGVSVPCTKVVNVKGSLSQKKVNNEYVILQELISACKTDKGFA EECCCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHCCCCEEHHHHHHHHHCCCCCEE LKVSFTPTKFKFDHSFDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLINN EEEEECCCEEEECCCCCCHHCCCCCCCCCEEHHCCEEEEEECCCCCCCCCCCEEEEEECC EKKEQNKALNEFNIDLKDLKDIEDINILNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIP CHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEC KNIAKVYKSAYKEFKNKDLGAGYFTQLHEYDKIIKNALEDNKELNEYHFSFLTPAKMQNL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECHHHHHHH KLQIAQGLDEILEDEDRKQELYVCKFVVVNGVSENNTQEIIPDNVIRIQTQDGSGEFIEI HHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEE VFPSQLELNDKPLEDVSYTFVPALKFFKDTEYLKPRTLTKDEVLQIVDKLPKNVRDKRRR EECCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH IVENKEELDKLWKKLTKNSEEFENKVDKKYGQPIYMRKLDDQTIIQYKKTSKSGGETIEI HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCEEEE NSNKPRGNLKTIHIENGIKNEI CCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA