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The map label for this gene is 57237834

Identifier: 57237834

GI number: 57237834

Start: 1017649

End: 1019049

Strand: Reverse

Name: 57237834

Synonym: CJE1089

Alternate gene names: NA

Gene position: 1019049-1017649 (Counterclockwise)

Preceding gene: 57237839

Following gene: 57237833

Centisome position: 57.32

GC content: 27.41

Gene sequence:

>1401_bases
ATGAATAATATTTTAATTATAATAGATGGTATTTTAGCAAAGCATTTCTTAGAAAGGCTTTGTTTTGAAAAAGGCTTAGG
TTACTTTTTTACAGTAGTGTGTCAAAATAGTGAAAAAAATAACTTAAATATTTCTAGTGAGTATATTGACTTGCATTATT
TTGATCCTACAAGCACAGCGCGTCTTGAAAATATTATAAGTAAAGATTTTAAACAGGCTTTTATTTATATGCAAGATGAA
TTTGAAACTAAAAAAAGTTATGAGGCTTTGCGTTCTTTAAATCCAAATTTAGAAATAGAAATAATGGATTTTTGGGGGTT
AAGTGTTAATGATACTCATGCAAATTTAGCTGATGCTAGAATGACTTTAAGCCGTAGATTTATGGATTTTTTACCAGATA
TTGCTTTAACAGCTCAGTATATAGGACTTGGGGTTGGAGAGATTATGGAAGTAAAAATTCCAGCAGGGTCTATTTTTGCT
TATAGGCACATAAGTTCAATACAACAAAAAAGGTGGCGCATAGTCCTTATTTATAGAAATTCTAAGATTTATTTTGTAAA
ACCATCTTTTGTTTTAGAGCCAAATGATAGCATTTTGATCGTTGGAGATCCTGTTGTTTTACAAAGTATTTTTCATAATA
TAAGAGGCAAAGCAGGGCAATTTCCTATGCCTTTTGGAAGTAATGTTTTTGCTTTAATTGATATGAAAAATATGAATCAA
AATATGCAAGAAAGAGTGCTTGATACTACTTTAAAATTAACTCAAAAAAGCAATGCAAAAAGATTTTTTATACATGTTAT
CAATCCTAAATTAGGGGTAATGTATGAAAAATTAAAAAAACTTTCTGAGGATAAAGAAGGTGTGTTTTTTGATTATTTCA
ACACGGATTTTAAACAAATTTCCATGTGGTTGCAAAATAATGATATAGGATTAGTTGTAACTGATATAAAAAATTTTGAG
AAAGAAAAACAAGTTTTTTTTGATTTAAAAATTCCTATTATGAAGGTGGGCGAAGCTTCTTTTGATGAGCTTAAAGAAGC
GATTATTTTAAGTGCTGATGAGAGTGAACTTGAAAACAATGCAAATGTCATTACTGATTTAAGTAAACAGCTTGATTTTG
GAGTTATTTTATATTATTATAATCCAAATTCTCAAAATACTACAGATATGGAGGAGTATTTTAGAAGTTTATCTAAGCTT
TATGATAAAAATATACAAATTATTAATAAAAATGATGAAAACCCTCTTTTAAATTTGCAATATCGCGAAGATTTATTACA
ATTTGTGAGTTTTCAAAAAGAATTACTAAATAGAGATTTTGCCAGAAATTTAAGTACAAATTTAAATAGGCATTATTACA
AAATGAGACAAAATTACCAACTTTTCATACCAGTAGAATAA

Upstream 100 bases:

>100_bases
AAAGTGCTGTGTGCGGTAGTGATTTCACAAACCCTTGCCATTCCATCTTTATGCTTTAATTTAAATTCCATTTGTTATAA
TTTCCTTTTTGGAGTTTAAA

Downstream 100 bases:

>100_bases
ATAATTAATTAAATGTGATAAAATAAATGCAAAAAGAGTAGTTCAATGCAAGTAGAAGTTAAGTTAAAAGAAAATGCTTA
TAAGGTTTATATTGATGAAC

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: TrkA-C; TrkA-C Domain-Containing Protein; TrkA Domain Protein; Trka-C Domain Protein; TrkA-C Domain Protein

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNISSEYIDLHYFDPTSTARLENIISKDFKQAFIYMQDE
FETKKSYEALRSLNPNLEIEIMDFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKAGQFPMPFGSNVFALIDMKNMNQ
NMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYEKLKKLSEDKEGVFFDYFNTDFKQISMWLQNNDIGLVVTDIKNFE
KEKQVFFDLKIPIMKVGEASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNTTDMEEYFRSLSKL
YDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFARNLSTNLNRHYYKMRQNYQLFIPVE

Sequences:

>Translated_466_residues
MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNISSEYIDLHYFDPTSTARLENIISKDFKQAFIYMQDE
FETKKSYEALRSLNPNLEIEIMDFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKAGQFPMPFGSNVFALIDMKNMNQ
NMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYEKLKKLSEDKEGVFFDYFNTDFKQISMWLQNNDIGLVVTDIKNFE
KEKQVFFDLKIPIMKVGEASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNTTDMEEYFRSLSKL
YDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFARNLSTNLNRHYYKMRQNYQLFIPVE
>Mature_466_residues
MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNISSEYIDLHYFDPTSTARLENIISKDFKQAFIYMQDE
FETKKSYEALRSLNPNLEIEIMDFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKAGQFPMPFGSNVFALIDMKNMNQ
NMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYEKLKKLSEDKEGVFFDYFNTDFKQISMWLQNNDIGLVVTDIKNFE
KEKQVFFDLKIPIMKVGEASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNTTDMEEYFRSLSKL
YDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFARNLSTNLNRHYYKMRQNYQLFIPVE

Specific function: Unknown

COG id: COG3400

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54527; Mature: 54527

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNISSEYIDLHYFDPTSTA
CCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEEEEEECCCCHH
RLENIISKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIMDFWGLSVNDTHANLADAR
HHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCEECCCCCCHHHHH
MTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFAYRHISSIQQKRWRIVLIYRN
HHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEC
SKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKAGQFPMPFGSNVFALIDMKNMNQ
CEEEEECCEEEECCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC
NMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYEKLKKLSEDKEGVFFDYFNTDFKQI
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
SMWLQNNDIGLVVTDIKNFEKEKQVFFDLKIPIMKVGEASFDELKEAIILSADESELENN
EEEEECCCEEEEEECCCCCCCHHEEEEEEECCEEECCCCCHHHHHHHEEEECCHHHHCCC
ANVITDLSKQLDFGVILYYYNPNSQNTTDMEEYFRSLSKLYDKNIQIINKNDENPLLNLQ
CHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEH
YREDLLQFVSFQKELLNRDFARNLSTNLNRHYYKMRQNYQLFIPVE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNISSEYIDLHYFDPTSTA
CCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEEEEEECCCCHH
RLENIISKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIMDFWGLSVNDTHANLADAR
HHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCEECCCCCCHHHHH
MTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFAYRHISSIQQKRWRIVLIYRN
HHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEC
SKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKAGQFPMPFGSNVFALIDMKNMNQ
CEEEEECCEEEECCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC
NMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYEKLKKLSEDKEGVFFDYFNTDFKQI
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
SMWLQNNDIGLVVTDIKNFEKEKQVFFDLKIPIMKVGEASFDELKEAIILSADESELENN
EEEEECCCEEEEEECCCCCCCHHEEEEEEECCEEECCCCCHHHHHHHEEEECCHHHHCCC
ANVITDLSKQLDFGVILYYYNPNSQNTTDMEEYFRSLSKLYDKNIQIINKNDENPLLNLQ
CHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEH
YREDLLQFVSFQKELLNRDFARNLSTNLNRHYYKMRQNYQLFIPVE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA