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The map label for this gene is yeiE [H]

Identifier: 57237825

GI number: 57237825

Start: 1007718

End: 1008599

Strand: Direct

Name: yeiE [H]

Synonym: CJE1080

Alternate gene names: 57237825

Gene position: 1007718-1008599 (Clockwise)

Preceding gene: 57237822

Following gene: 57237826

Centisome position: 56.68

GC content: 26.19

Gene sequence:

>882_bases
ATGAAAATCAAAGATATGGAAATATTTTTAGATCTTTTAAACACTCAAAGTCCAACTCATACAGCCAACAATTTTTCCAT
AACTCAACCTAATGTTTCAATAGTAATTAAAAATTTAGAAAATAAATTTGATGGCATTTTATTTGAAAGACTTGGAAAAA
AACTCTTACCTACACCAAAAGCTTTAGAACTAGGAAAAAATTGGTTAAAAATTATACAAGCCTACTACCAAAGCTTAGAA
AAATTAAACGACGAAAGTATGCTCTTAGGGGAAATAAAAATAGCCTCAACTCAAAGCATTTCTGAACATTTTTTAGCTCC
TATTTTATTTGATTTTAAGGCAGAATTTAAAAACATAGAAATTCGCTCTCAAACGCAGAATTCAAAAGAATGTTTAAATT
TACTAAAAAACGGAAATATAGAATTTGCAATCATTGAAGCAGAACTTGATCCAGCTTTAGTGGAGTATGAAAATTTAGAA
ATAAATTTTTGGCAAGATGATGAACTTATAGTAGCTACAAGTGATAAAAAACTCAATGAAAAAGAATTTTATATCGATGA
ACTTTTGGAACAAAAGTGGATTTTAAGAGAAGTAGGCTCAGGCTTAAGGGATAAATTTTTAAACGAAATTGGTGCAAGCT
CAAAAAAACTTAATATTTTTCTTGAACTTGATAGAATGGCTGCGATTAAAGAACTTGTTTTACAAAAAAAAGCAATCTCT
ATTTTTTCCAAAAAAAGCATAGAAAAAGAATTAAAAAATTCAACACTTTATGAAATTAAATTAAAAAATATCGACCTAAA
GCGTAAATTTTATACCTTAAAAAGAAAAAATTATAATTTTAACAGAGCTTTAGAAAAATTTGAAAAAATATTCAAATCAT
AA

Upstream 100 bases:

>100_bases
TTGTAAATTTTGTGTTATTATATTTTTTTTATTAAAATTATAGAAATATATTATTTTAATTTTTATAATAAATTTTTTTT
ATTAAATAAAGGAATCACTC

Downstream 100 bases:

>100_bases
ACATAATAACCGATTTATATAGAAAGTTAAGCAATTTTTAGATAAAATCCAAAGCTTATATAAATTTCAAGGATAATCAA
TGAACGCCAAAACTCAAGAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKIKDMEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFDGILFERLGKKLLPTPKALELGKNWLKIIQAYYQSLE
KLNDESMLLGEIKIASTQSISEHFLAPILFDFKAEFKNIEIRSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLE
INFWQDDELIVATSDKKLNEKEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLNIFLELDRMAAIKELVLQKKAIS
IFSKKSIEKELKNSTLYEIKLKNIDLKRKFYTLKRKNYNFNRALEKFEKIFKS

Sequences:

>Translated_293_residues
MKIKDMEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFDGILFERLGKKLLPTPKALELGKNWLKIIQAYYQSLE
KLNDESMLLGEIKIASTQSISEHFLAPILFDFKAEFKNIEIRSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLE
INFWQDDELIVATSDKKLNEKEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLNIFLELDRMAAIKELVLQKKAIS
IFSKKSIEKELKNSTLYEIKLKNIDLKRKFYTLKRKNYNFNRALEKFEKIFKS
>Mature_293_residues
MKIKDMEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFDGILFERLGKKLLPTPKALELGKNWLKIIQAYYQSLE
KLNDESMLLGEIKIASTQSISEHFLAPILFDFKAEFKNIEIRSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLE
INFWQDDELIVATSDKKLNEKEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLNIFLELDRMAAIKELVLQKKAIS
IFSKKSIEKELKNSTLYEIKLKNIDLKRKFYTLKRKNYNFNRALEKFEKIFKS

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=295, Percent_Identity=24.7457627118644, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34195; Mature: 34195

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKDMEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFDGILFERLGKKLLPTPK
CCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHCCHHHCCCCH
ALELGKNWLKIIQAYYQSLEKLNDESMLLGEIKIASTQSISEHFLAPILFDFKAEFKNIE
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEE
IRSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLEINFWQDDELIVATSDKKLNE
EECCCCCHHHHHHHHHCCCEEEEEEEECCCCHHEEEECCEEEEECCCCEEEEECCCCCCH
KEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLNIFLELDRMAAIKELVLQKKAIS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
IFSKKSIEKELKNSTLYEIKLKNIDLKRKFYTLKRKNYNFNRALEKFEKIFKS
HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIKDMEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFDGILFERLGKKLLPTPK
CCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHCCHHHCCCCH
ALELGKNWLKIIQAYYQSLEKLNDESMLLGEIKIASTQSISEHFLAPILFDFKAEFKNIE
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEE
IRSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLEINFWQDDELIVATSDKKLNE
EECCCCCHHHHHHHHHCCCEEEEEEEECCCCHHEEEECCEEEEECCCCEEEEECCCCCCH
KEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLNIFLELDRMAAIKELVLQKKAIS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
IFSKKSIEKELKNSTLYEIKLKNIDLKRKFYTLKRKNYNFNRALEKFEKIFKS
HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]