Click here to switch to the map view.

The map label for this gene is yicL [H]

Identifier: 57237701

GI number: 57237701

Start: 883885

End: 884757

Strand: Direct

Name: yicL [H]

Synonym: CJE0947

Alternate gene names: 57237701

Gene position: 883885-884757 (Clockwise)

Preceding gene: 57237697

Following gene: 57237705

Centisome position: 49.72

GC content: 28.98

Gene sequence:

>873_bases
ATGGGCGTATTTTTAGTTCTTTTGGGAGGTATTTTTTGGGCTATTAGCGGTGTTTTAGCTGAATACCTTTTTAAAAATAA
TTATAGCGTAGATTGGGTTTGTTTTTATAGGCTTTTATCTACAGGGTTAATTTTAATTTTTTTAAGTTTTAAAACTCAAA
AAATTTTAGTTTTTGCAAATTTAAAAGAAAGCTTAAGTATTTGTATATTTGGATTTTTTGGGCTTTTGCTAACACAATTT
GGTTATTTTAAGGCTATTTATTATACCGATGCTGGAACTGCAACTATGATACAATATTGTGCACCTTTAATTATAATGCT
TTATTTGTGCTTTAAAAATAAAAAATTTCCTAAATTGATAGAAATTTTTGCTTTGATTTTGATTATTTTTGCTTTGTTTT
TACTTGCAACTAAAGGAGATATTGAAGCGGTGGTTTTAAATTATTGGGGTATTTTTTGGGCTGTTATAGGAGCTTTTGGA
GTTGCTTTTTATTCTTTAAGTGCTAGAGAAGTGATATTAAAATATGGTCTTTTTTGGATAATGGGTTGGGCGAGTCTTTT
TGCTTCTTTTGTATTTTTATTAATCTTGCAATTTGATAAGGGTTTAATTCACTATGCTTTTAACTTAAAAGCATTTTTTT
CTATGGGCGGGATTGTCTTTATCGGAACTATAGGGGCTTTTTGTTTGTATTTAAAAGGAGTGGAATATATAGGCGCTCTA
AGAGCCAGTATGATTGCCTCCATAGAACCTGTAGCAGCTGCTTTAATGAGTTTTTTATTTTTAAAAACCCGTTATAGCTT
GCTTGATATTTTTGCTTTTGTTTTGATTATATTGAGTGTTATTTTAAATGCAAAAAAGACTAAAGCTTCATAA

Upstream 100 bases:

>100_bases
TTTGCATATTTTCTCCTTAATTTATAATATATATTACACTAAATCGACATTATTTTAAAAAATATACTATAATTTAAAAT
AATTTTTATTAAGGTTTGCA

Downstream 100 bases:

>100_bases
AGTTTTTAAGTATTTTTTTGCCTTTTTGAGTTAAAACCGCTTCAGGGTGAAATTGCAATCCATAAATAGGATATTTTTTA
TGTTTAATTGCCATAATAAT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MGVFLVLLGGIFWAISGVLAEYLFKNNYSVDWVCFYRLLSTGLILIFLSFKTQKILVFANLKESLSICIFGFFGLLLTQF
GYFKAIYYTDAGTATMIQYCAPLIIMLYLCFKNKKFPKLIEIFALILIIFALFLLATKGDIEAVVLNYWGIFWAVIGAFG
VAFYSLSAREVILKYGLFWIMGWASLFASFVFLLILQFDKGLIHYAFNLKAFFSMGGIVFIGTIGAFCLYLKGVEYIGAL
RASMIASIEPVAAALMSFLFLKTRYSLLDIFAFVLIILSVILNAKKTKAS

Sequences:

>Translated_290_residues
MGVFLVLLGGIFWAISGVLAEYLFKNNYSVDWVCFYRLLSTGLILIFLSFKTQKILVFANLKESLSICIFGFFGLLLTQF
GYFKAIYYTDAGTATMIQYCAPLIIMLYLCFKNKKFPKLIEIFALILIIFALFLLATKGDIEAVVLNYWGIFWAVIGAFG
VAFYSLSAREVILKYGLFWIMGWASLFASFVFLLILQFDKGLIHYAFNLKAFFSMGGIVFIGTIGAFCLYLKGVEYIGAL
RASMIASIEPVAAALMSFLFLKTRYSLLDIFAFVLIILSVILNAKKTKAS
>Mature_289_residues
GVFLVLLGGIFWAISGVLAEYLFKNNYSVDWVCFYRLLSTGLILIFLSFKTQKILVFANLKESLSICIFGFFGLLLTQFG
YFKAIYYTDAGTATMIQYCAPLIIMLYLCFKNKKFPKLIEIFALILIIFALFLLATKGDIEAVVLNYWGIFWAVIGAFGV
AFYSLSAREVILKYGLFWIMGWASLFASFVFLLILQFDKGLIHYAFNLKAFFSMGGIVFIGTIGAFCLYLKGVEYIGALR
ASMIASIEPVAAALMSFLFLKTRYSLLDIFAFVLIILSVILNAKKTKAS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=293, Percent_Identity=31.740614334471, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32605; Mature: 32474

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVFLVLLGGIFWAISGVLAEYLFKNNYSVDWVCFYRLLSTGLILIFLSFKTQKILVFAN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
LKESLSICIFGFFGLLLTQFGYFKAIYYTDAGTATMIQYCAPLIIMLYLCFKNKKFPKLI
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
EIFALILIIFALFLLATKGDIEAVVLNYWGIFWAVIGAFGVAFYSLSAREVILKYGLFWI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGWASLFASFVFLLILQFDKGLIHYAFNLKAFFSMGGIVFIGTIGAFCLYLKGVEYIGAL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RASMIASIEPVAAALMSFLFLKTRYSLLDIFAFVLIILSVILNAKKTKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure 
GVFLVLLGGIFWAISGVLAEYLFKNNYSVDWVCFYRLLSTGLILIFLSFKTQKILVFAN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
LKESLSICIFGFFGLLLTQFGYFKAIYYTDAGTATMIQYCAPLIIMLYLCFKNKKFPKLI
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
EIFALILIIFALFLLATKGDIEAVVLNYWGIFWAVIGAFGVAFYSLSAREVILKYGLFWI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGWASLFASFVFLLILQFDKGLIHYAFNLKAFFSMGGIVFIGTIGAFCLYLKGVEYIGAL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RASMIASIEPVAAALMSFLFLKTRYSLLDIFAFVLIILSVILNAKKTKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 9311997 [H]