| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57237623
Identifier: 57237623
GI number: 57237623
Start: 809024
End: 809764
Strand: Direct
Name: 57237623
Synonym: CJE0869
Alternate gene names: NA
Gene position: 809024-809764 (Clockwise)
Preceding gene: 57237622
Following gene: 57237624
Centisome position: 45.51
GC content: 30.5
Gene sequence:
>741_bases ATGAAAAAAATATTAATTTTAAGTTTAGCAGCAGCAAGTTTTTTAAATGCTGAAATTTTAGTTTATGGTCCAGGTGGTCC CGCTCCTGTGCTAAAAGAGCTTGCTTTAAAATTTGAAGAAAAAACAAAAGAAAAGGTGATTGTAACCGCAGGTCCAACTC CAGCTTGGATAGACAAAGCAAAAGAAAATGCAGATTTGATTTTTTCAGGCAATACTTCAATGATGGATGATTTTGCTAAA AAAATTCCAAGTTTAAGTTTGGAAAATTTAAGCGTTTTAAATGTGCGTCCATCAGGTATTATCGTGCGTCCAAATAATCC AAAAAATATTAAAAATTTTGAAGACATTTTAAAAGATGACATAAATGTTATGGTGGTTGATGGCGCAGGACAAGTTGGAC TTTATGAAGATATGGCTTTAAAAAGTGCAAAAAGAGAAAATTTGGTAAAATTACGTAAAAATATAAAAATTTATGCTAAA AATTCCAAAGCTGCTGTAGATGAGTGGAATAACAATCCAAATATTGATGCTTTAATCATTTGGTCTCATTGGGCAAAGGC TTTAGGCGATGATAAAGCTTTATTTATCAAAGATAAAAATGCAGTGATTTATCGTGCAGCTGAAATTGCTCCTACAAAAA AAGGTTTAGAAAATAAAAAAGCTTTAGAATTTGTAGATTTTATTAAGAGTAAGGAAGCTCAAAAAGTGTGGAAAAAATAT ACTTGGAAAGAAGTAAAATAA
Upstream 100 bases:
>100_bases GCCCCTTCTCGTTTTCTTATAGAAGCAGGGCTTTGCAAGGGAGAGTTAACTATAGATTGATAAAATTTCCTTTATATTAT TATAAAGAAAGGTTTATTTT
Downstream 100 bases:
>100_bases TTTTGAGTGAAATTAAAAAATAATTAATATTTATAGGATATAATCACTCCTAAAACATTAATTGCAATAATGTTTAAAAT ATCAAAAAAGGAAATTAAAT
Product: major antigenic peptide PEB2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKKILILSLAAASFLNAEILVYGPGGPAPVLKELALKFEEKTKEKVIVTAGPTPAWIDKAKENADLIFSGNTSMMDDFAK KIPSLSLENLSVLNVRPSGIIVRPNNPKNIKNFEDILKDDINVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAK NSKAAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLENKKALEFVDFIKSKEAQKVWKKY TWKEVK
Sequences:
>Translated_246_residues MKKILILSLAAASFLNAEILVYGPGGPAPVLKELALKFEEKTKEKVIVTAGPTPAWIDKAKENADLIFSGNTSMMDDFAK KIPSLSLENLSVLNVRPSGIIVRPNNPKNIKNFEDILKDDINVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAK NSKAAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLENKKALEFVDFIKSKEAQKVWKKY TWKEVK >Mature_246_residues MKKILILSLAAASFLNAEILVYGPGGPAPVLKELALKFEEKTKEKVIVTAGPTPAWIDKAKENADLIFSGNTSMMDDFAK KIPSLSLENLSVLNVRPSGIIVRPNNPKNIKNFEDILKDDINVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAK NSKAAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLENKKALEFVDFIKSKEAQKVWKKY TWKEVK
Specific function: Unknown
COG id: COG4588
COG function: function code R; Accessory colonization factor AcfC, contains ABC-type periplasmic domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27464; Mature: 27464
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILILSLAAASFLNAEILVYGPGGPAPVLKELALKFEEKTKEKVIVTAGPTPAWIDKA CCEEEEEEEHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHC KENADLIFSGNTSMMDDFAKKIPSLSLENLSVLNVRPSGIIVRPNNPKNIKNFEDILKDD CCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHCC INVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAKNSKAAVDEWNNNPNIDALII CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHCCCCCCCEEEEEE WSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLENKKALEFVDFIKSKEAQKVWKKY EHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHC TWKEVK CCCCCC >Mature Secondary Structure MKKILILSLAAASFLNAEILVYGPGGPAPVLKELALKFEEKTKEKVIVTAGPTPAWIDKA CCEEEEEEEHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHC KENADLIFSGNTSMMDDFAKKIPSLSLENLSVLNVRPSGIIVRPNNPKNIKNFEDILKDD CCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHCC INVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAKNSKAAVDEWNNNPNIDALII CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHCCCCCCCEEEEEE WSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLENKKALEFVDFIKSKEAQKVWKKY EHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHC TWKEVK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA