| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237008
Identifier: 57237008
GI number: 57237008
Start: 741855
End: 742571
Strand: Direct
Name: 57237008
Synonym: CJE0806
Alternate gene names: NA
Gene position: 741855-742571 (Clockwise)
Preceding gene: 57237007
Following gene: 57237009
Centisome position: 41.73
GC content: 28.87
Gene sequence:
>717_bases ATGAATAAATATCTCGAACAATTAGTGCTTTTATCAAAAATAGATCAAGAAATTGATAGTTATGAACCAAAAATAGACAG TATTAATAGGACTTTAAAAGATGCTGAGTTAAAAATAGGAAAAATCAACACAGATTTAGAAAAAATCGATGAAGAAATCA AAGATATAGAAAATCAAAAAGTGCAAAATAATGCTCATATTTCTGAGTTTTCAGCAAAAATTAAAGAGCTTTCTAAAAAA AGTGGCGCAGTAAAAACAGAAAAAGAAGCTAATGCTTTAAAAATTGAAGAAGATATTGCAAAAGAGCAATTAGACGCTGC AAATGATGAGATTGTAAGACTGGATAAAATTTTAGAGAATAAAGAAACTTATAAAAAAGAACTCGAAGAAGAAAAAATCA AACAAGAGCAAAATATTAATGAGATTAGAGTAAGTATTAAATCTGAAATGGAAGTTCTTGAAAAAGATAGAATGAGTGTT TATGATAAAAAAACCAAACTTGTGGGCGAGATGAATCAAAAAGTTCTAAGTTTTTATGAGAAAATTCGCAAATGGGCGAA AAATACTGCTGTAGTACCCGTTAAGAAACAAGCATGCTATGGATGTTTTATGAAAATTTACGATAAGACCTATCTATCTG TTGTAAAAGGCGAAGAGATTGTAACTTGCCCCCATTGTGGAAGAATTCTTTATAAAGAGCAAGAAGAACAAAATTGA
Upstream 100 bases:
>100_bases ATATTTTTCTCAATGTTTAGCAAAAGACTTGAAAAATTTGCCACTACAAGTTATAATAACAGTTTCAAAAAATCCATTTC AATATTTTTAAGGAAAATAA
Downstream 100 bases:
>100_bases TCTTTTTTTATTATTTTTTAACTTGGACGGCATTTTTATTTTGTGCTGTCTTTATTCTTTTGCTTTCTTTTTTAAAATCC AAATACAAAACTAGTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNKYLEQLVLLSKIDQEIDSYEPKIDSINRTLKDAELKIGKINTDLEKIDEEIKDIENQKVQNNAHISEFSAKIKELSKK SGAVKTEKEANALKIEEDIAKEQLDAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSV YDKKTKLVGEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGEEIVTCPHCGRILYKEQEEQN
Sequences:
>Translated_238_residues MNKYLEQLVLLSKIDQEIDSYEPKIDSINRTLKDAELKIGKINTDLEKIDEEIKDIENQKVQNNAHISEFSAKIKELSKK SGAVKTEKEANALKIEEDIAKEQLDAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSV YDKKTKLVGEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGEEIVTCPHCGRILYKEQEEQN >Mature_238_residues MNKYLEQLVLLSKIDQEIDSYEPKIDSINRTLKDAELKIGKINTDLEKIDEEIKDIENQKVQNNAHISEFSAKIKELSKK SGAVKTEKEANALKIEEDIAKEQLDAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSV YDKKTKLVGEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGEEIVTCPHCGRILYKEQEEQN
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27740; Mature: 27740
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYLEQLVLLSKIDQEIDSYEPKIDSINRTLKDAELKIGKINTDLEKIDEEIKDIENQK CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH VQNNAHISEFSAKIKELSKKSGAVKTEKEANALKIEEDIAKEQLDAANDEIVRLDKILEN HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSVYDKKTKLVGEMNQKVLSFYE HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGEEIVTCPHCGRILYKEQEEQN HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCC >Mature Secondary Structure MNKYLEQLVLLSKIDQEIDSYEPKIDSINRTLKDAELKIGKINTDLEKIDEEIKDIENQK CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH VQNNAHISEFSAKIKELSKKSGAVKTEKEANALKIEEDIAKEQLDAANDEIVRLDKILEN HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSVYDKKTKLVGEMNQKVLSFYE HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGEEIVTCPHCGRILYKEQEEQN HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA