| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is yegQ [C]
Identifier: 57237004
GI number: 57237004
Start: 737964
End: 739217
Strand: Direct
Name: yegQ [C]
Synonym: CJE0801
Alternate gene names: 57237004
Gene position: 737964-739217 (Clockwise)
Preceding gene: 57237003
Following gene: 57237005
Centisome position: 41.51
GC content: 31.98
Gene sequence:
>1254_bases ATGATCATTCCTGAAATAGTAGCTCCTGCAGGAAATTTCACAAAATTAAAAATTGCTTTAGCTTATGGCGCAGATGCGGT TTATGCGGGTGTGAATAATTTTTCTTTAAGATCACGCACTGCAAGAGAATTTAATTATGAAAGTTTTGAAGAAGCTATTA AATATACCCATAAGTGTGGTAAGAAAATTTATGTTACTTTAAATGGTTTTCATTTAAGCTCCCAAATTGAAGGTTTAAAA AGACATATTTTAAAATTGCGTGAGATGAAACCTGATGCTTTTATTGTAGCTTCTGTTGGAGCTATGCGTCTTGTTAAAGA ACTTGCACCTGAAATTTCTTTACATGTTTCTACTCAGGCAAATATTTTAAATTATTTAGATGCTCAAGTTTATAAGGATA TGGGTGCTAAAAGGGTTGTAATTGCCAGAGAATTAGGGCTTAAAGACGCTAAAGCTTTAAAGGAAAATTGCGATATTGAA CTTGAAGCTTTTGTGCATGGTTCTATGTGTTTTGCTTATTCAGGGCGTTGTTTAATAAGCTCTGTGCAAAGTGGAAGAAT GAGCAATCGTGGATCTTGTGCAAATGACTGTAGATTTAATTATGAGCTTTATGCTAAAAATCCAGAAAATGGCACTTTAT TTCGCTTAGAAGAAGATGAAAATGGTACTCATGTGTTTAATTCTAAGGATTTAAATCTTTGTTCTTATATAGAAAAAATC ATGCAAGAAAATTGTATCAGTGCTTTTAAAATAGAAGGGCGTACTAAAAGCGAATATTATGTTGCGCTTACAACAAGGAC TTATAAAATGGCCATACAAGATGCTTTAGAGAGTAAATTTGAGTCAAGTAAGTATGAAAAAGAGATTACTACACTTAAAA ATCGTGGTTTTACAGATGGTTATCTTGTTTCGCGTCCTTTAGAAAAAACCGACACGCAAAATCATAATACAAGCATAGAA GAAGGTTCTCATCAAGTGCATGCTATAAGCGAAGATGGAAGCTTTTTTAAATGTAAAGGGAAAATCGTTTTAAACACGCC TTATGAAATTTTAGCCCCTTTAGGCGATGTGATTCAAACTTGCGATAATGAACTAGGTAAAATTTATCAAAAAGAGGATA AATATTTTATAGAGTTTAAAAAACTCATTGCTAAAAACAATAAGGAATTTAGCGAAATTCATAGTGGCAATGAACATGAA ATCCAATTACCAAATAAAATCAGTGCATTAAGTTTTTTAAGAAAGGAAATATAG
Upstream 100 bases:
>100_bases AAAAACGTGTAAGTTCTGCAGTGCATATTGAAGGTGATAGTACTGCTGATGTTGTAAGTAATGATGATATAGAAGCTTTA ATTGCAAGTTTAGGGCAAAA
Downstream 100 bases:
>100_bases ATGAATTTTGTTTCTATTTTAATGGGAAGCAAGAGTGATTATGAGACTATGAAAGAGGCTGCTAAAACTTTAGAAAGTTT TGGGGTAAAGTATGAACTTA
Product: U32 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREFNYESFEEAIKYTHKCGKKIYVTLNGFHLSSQIEGLK RHILKLREMKPDAFIVASVGAMRLVKELAPEISLHVSTQANILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIE LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEEDENGTHVFNSKDLNLCSYIEKI MQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDALESKFESSKYEKEITTLKNRGFTDGYLVSRPLEKTDTQNHNTSIE EGSHQVHAISEDGSFFKCKGKIVLNTPYEILAPLGDVIQTCDNELGKIYQKEDKYFIEFKKLIAKNNKEFSEIHSGNEHE IQLPNKISALSFLRKEI
Sequences:
>Translated_417_residues MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREFNYESFEEAIKYTHKCGKKIYVTLNGFHLSSQIEGLK RHILKLREMKPDAFIVASVGAMRLVKELAPEISLHVSTQANILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIE LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEEDENGTHVFNSKDLNLCSYIEKI MQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDALESKFESSKYEKEITTLKNRGFTDGYLVSRPLEKTDTQNHNTSIE EGSHQVHAISEDGSFFKCKGKIVLNTPYEILAPLGDVIQTCDNELGKIYQKEDKYFIEFKKLIAKNNKEFSEIHSGNEHE IQLPNKISALSFLRKEI >Mature_417_residues MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREFNYESFEEAIKYTHKCGKKIYVTLNGFHLSSQIEGLK RHILKLREMKPDAFIVASVGAMRLVKELAPEISLHVSTQANILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIE LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEEDENGTHVFNSKDLNLCSYIEKI MQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDALESKFESSKYEKEITTLKNRGFTDGYLVSRPLEKTDTQNHNTSIE EGSHQVHAISEDGSFFKCKGKIVLNTPYEILAPLGDVIQTCDNELGKIYQKEDKYFIEFKKLIAKNNKEFSEIHSGNEHE IQLPNKISALSFLRKEI
Specific function: Unknown
COG id: COG0826
COG function: function code O; Collagenase and related proteases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U32 family [H]
Homologues:
Organism=Escherichia coli, GI1788397, Length=401, Percent_Identity=33.4164588528678, Blast_Score=216, Evalue=2e-57, Organism=Escherichia coli, GI87081910, Length=362, Percent_Identity=30.1104972375691, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1789548, Length=294, Percent_Identity=27.891156462585, Blast_Score=114, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001539 [H]
Pfam domain/function: PF01136 Peptidase_U32 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 47232; Mature: 47232
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS01276 PEPTIDASE_U32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREFNYESFEEAIKYTHKCG CCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHCC KKIYVTLNGFHLSSQIEGLKRHILKLREMKPDAFIVASVGAMRLVKELAPEISLHVSTQA CEEEEEEECEECHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEEEEEECHH NILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIELEAFVHGSMCFAYSGRCLIS HHHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHCCCEEEEEEEECCEEEEECCHHHHH SVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEEDENGTHVFNSKDLNLCSYIEKI HHHCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHH MQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDALESKFESSKYEKEITTLKNRGFTDG HHHCCCCEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YLVSRPLEKTDTQNHNTSIEEGSHQVHAISEDGSFFKCKGKIVLNTPYEILAPLGDVIQT EEECCCCHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECEEEEECCHHHHHHHHHHHHH CDNELGKIYQKEDKYFIEFKKLIAKNNKEFSEIHSGNEHEIQLPNKISALSFLRKEI HHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCCEEECCCHHHHHHHHHHCC >Mature Secondary Structure MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREFNYESFEEAIKYTHKCG CCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHCC KKIYVTLNGFHLSSQIEGLKRHILKLREMKPDAFIVASVGAMRLVKELAPEISLHVSTQA CEEEEEEECEECHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEEEEEECHH NILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIELEAFVHGSMCFAYSGRCLIS HHHHHHHHHHHHHCCCCEEEEEHHCCCHHHHHHHHCCCEEEEEEEECCEEEEECCHHHHH SVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEEDENGTHVFNSKDLNLCSYIEKI HHHCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHH MQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDALESKFESSKYEKEITTLKNRGFTDG HHHCCCCEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YLVSRPLEKTDTQNHNTSIEEGSHQVHAISEDGSFFKCKGKIVLNTPYEILAPLGDVIQT EEECCCCHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECEEEEECCHHHHHHHHHHHHH CDNELGKIYQKEDKYFIEFKKLIAKNNKEFSEIHSGNEHEIQLPNKISALSFLRKEI HHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCCEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]