Click here to switch to the map view.

The map label for this gene is yaeL [C]

Identifier: 55980824

GI number: 55980824

Start: 816970

End: 817980

Strand: Reverse

Name: yaeL [C]

Synonym: TTHA0855

Alternate gene names: 55980824

Gene position: 817980-816970 (Counterclockwise)

Preceding gene: 55980825

Following gene: 55980823

Centisome position: 44.22

GC content: 70.43

Gene sequence:

>1011_bases
ATGAGCCTGTTCTGGTTTCTGGTCATCATCGGCGTCAGCGTCTTCGTCCACGAGCTCGGTCACTACCTGGCGGCGAGGCT
TCAAGGGGTACGGGTCAAGGCCTTCAGCGTCGGCTTCGGCCCGGTCCTTTGGCGAAGGGAGGCCTGGGGAACGGAGTGGC
GGCTTTCCGCCATCCCCCTAGGGGGGTACGCCGACATCGAGGGCCTCCTCCCCGAGGAAAAGGGGAGGGGGTACGACGCC
CTCCCCTTCCTGGGGAAGCTCCTCGTCCTGGTGGCGGGGGTGGCCATGAACGTCCTCCTCGCCTGGGGCCTCCTCGCCTA
CCTCTTCAGCGCCCAGGGGGTGCCCGAGGCCACGGGCCGGGCGGTGATCCTCGAGGTCCTGCCGGGGAGCGTGGCCGAGG
AGGCGGGGCTCAAACCGGGGGACATCCTCCTCGCCGTGGACGGGAAGCCTTTGGAAAGGCCCCAGGAGATTGAGCGGCTC
AAAACCCCGGGCGCCCACACCCTGGCCGTGCTCCGCCAGGGGGAGGAGGTGACCCTCTCCCTCACCTGGGAGGAGGGGAT
GGAGCGCCTGGGGGTGGTCTACCAGCCGGAGGTGGCCTACCGCAGGGTGGGCTTCCTGGAGGGGCTCGGCCTCGCCGCGG
GGCGGACCCTCGCCTTCGGGCCCGCCCTCGTCCAGGCCCTGGTGGGGGGGCTTCTCGGCGTCCTCGCGGGGAACCCCGAT
AGCGGCGTCCTCGGTCCCGTGGGCATCCTGGCGGAGACGGGGCGGGCGGCCCAGGAGGGGCTTTTCCGCCTGGTGGAGCT
CGCCGCCGCCATCAACCTCTCCCTCGCCCTCTTCAACCTCCTCCCCATCCCCGCCTTGGACGGCGGCCGCATCCTCCTCC
TCTTCCTCGGCCGCTTCCTCCGCCTCCGGCCCGAGCAGGAGGCCACCGTCCACTACCTGGGCTTCCTCTTCCTCCTTCTC
CTTCTCCTCCTGGTCACCTTCCAGGACCTGAGGCGGCTTCTCGGAGGGTGA

Upstream 100 bases:

>100_bases
TCCTGGCCCGGGTGCTGGAAGCCACCCCTATAGAGCCTCTAACATGGGAGAGCCTCTTCGCCGTGGACGCCTGGGCCCGG
GAGGAGGCCAAGAGGTGGGC

Downstream 100 bases:

>100_bases
AGTGGCGGAGGCCACGGTCCTGATCCCCGCCTTCAACGAGGAGGCCACCGTGGGCCGGGTGGTGCGGGTGGCCCGGGAAG
CGGGGTTTCCCGTGGTGGTG

Product: membrane-associated Zn-dependent protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSLFWFLVIIGVSVFVHELGHYLAARLQGVRVKAFSVGFGPVLWRREAWGTEWRLSAIPLGGYADIEGLLPEEKGRGYDA
LPFLGKLLVLVAGVAMNVLLAWGLLAYLFSAQGVPEATGRAVILEVLPGSVAEEAGLKPGDILLAVDGKPLERPQEIERL
KTPGAHTLAVLRQGEEVTLSLTWEEGMERLGVVYQPEVAYRRVGFLEGLGLAAGRTLAFGPALVQALVGGLLGVLAGNPD
SGVLGPVGILAETGRAAQEGLFRLVELAAAINLSLALFNLLPIPALDGGRILLLFLGRFLRLRPEQEATVHYLGFLFLLL
LLLLVTFQDLRRLLGG

Sequences:

>Translated_336_residues
MSLFWFLVIIGVSVFVHELGHYLAARLQGVRVKAFSVGFGPVLWRREAWGTEWRLSAIPLGGYADIEGLLPEEKGRGYDA
LPFLGKLLVLVAGVAMNVLLAWGLLAYLFSAQGVPEATGRAVILEVLPGSVAEEAGLKPGDILLAVDGKPLERPQEIERL
KTPGAHTLAVLRQGEEVTLSLTWEEGMERLGVVYQPEVAYRRVGFLEGLGLAAGRTLAFGPALVQALVGGLLGVLAGNPD
SGVLGPVGILAETGRAAQEGLFRLVELAAAINLSLALFNLLPIPALDGGRILLLFLGRFLRLRPEQEATVHYLGFLFLLL
LLLLVTFQDLRRLLGG
>Mature_335_residues
SLFWFLVIIGVSVFVHELGHYLAARLQGVRVKAFSVGFGPVLWRREAWGTEWRLSAIPLGGYADIEGLLPEEKGRGYDAL
PFLGKLLVLVAGVAMNVLLAWGLLAYLFSAQGVPEATGRAVILEVLPGSVAEEAGLKPGDILLAVDGKPLERPQEIERLK
TPGAHTLAVLRQGEEVTLSLTWEEGMERLGVVYQPEVAYRRVGFLEGLGLAAGRTLAFGPALVQALVGGLLGVLAGNPDS
GVLGPVGILAETGRAAQEGLFRLVELAAAINLSLALFNLLPIPALDGGRILLLFLGRFLRLRPEQEATVHYLGFLFLLLL
LLLVTFQDLRRLLGG

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=166, Percent_Identity=38.5542168674699, Blast_Score=91, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR008915 [H]

Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 36106; Mature: 35975

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFWFLVIIGVSVFVHELGHYLAARLQGVRVKAFSVGFGPVLWRREAWGTEWRLSAIPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEECC
GGYADIEGLLPEEKGRGYDALPFLGKLLVLVAGVAMNVLLAWGLLAYLFSAQGVPEATGR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AVILEVLPGSVAEEAGLKPGDILLAVDGKPLERPQEIERLKTPGAHTLAVLRQGEEVTLS
EEEEEECCCCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHCCCEEEEE
LTWEEGMERLGVVYQPEVAYRRVGFLEGLGLAAGRTLAFGPALVQALVGGLLGVLAGNPD
EEHHHHHHHCCCEECCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SGVLGPVGILAETGRAAQEGLFRLVELAAAINLSLALFNLLPIPALDGGRILLLFLGRFL
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RLRPEQEATVHYLGFLFLLLLLLLVTFQDLRRLLGG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLFWFLVIIGVSVFVHELGHYLAARLQGVRVKAFSVGFGPVLWRREAWGTEWRLSAIPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEECC
GGYADIEGLLPEEKGRGYDALPFLGKLLVLVAGVAMNVLLAWGLLAYLFSAQGVPEATGR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AVILEVLPGSVAEEAGLKPGDILLAVDGKPLERPQEIERLKTPGAHTLAVLRQGEEVTLS
EEEEEECCCCHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHCCCEEEEE
LTWEEGMERLGVVYQPEVAYRRVGFLEGLGLAAGRTLAFGPALVQALVGGLLGVLAGNPD
EEHHHHHHHCCCEECCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SGVLGPVGILAETGRAAQEGLFRLVELAAAINLSLALFNLLPIPALDGGRILLLFLGRFL
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RLRPEQEATVHYLGFLFLLLLLLLVTFQDLRRLLGG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]