Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is bdbD [H]

Identifier: 55980792

GI number: 55980792

Start: 787610

End: 788245

Strand: Reverse

Name: bdbD [H]

Synonym: TTHA0823

Alternate gene names: 55980792

Gene position: 788245-787610 (Counterclockwise)

Preceding gene: 55980793

Following gene: 55980791

Centisome position: 42.61

GC content: 70.13

Gene sequence:

>636_bases
ATGCCGCGCGCGATCGTTCTCGTGGTGCTGGGACTCGCCCTCCTGGGCCTCGGCTGGATCCTCTGGGGGCCCAAGGGCAA
GGCAGGGCTGGACCCGGCGGAAGGGGCCCGTTTCGCCCTGGGGCGGGAGGACGCCCCCGTCGTGGTCGTGGACTTCTCCA
ACTACCTCTGCCCCCACTGCCAAAACCACGCCCTAAACGTCCTCCCCCGGCTCAAGGCGGAGTACATCGACACGGGGAAG
GTGCGCTACCTCTTCCGCGACTTCCCCTTCCCCGGGCAGGCGAACGTGATCCGGGCGAGCGAGGCCGCGGCCTGCGCCGC
CGAGCAGGGACGCTACTACGATTACCACGAGGTCCTCTTCCGGGCGGCGGCGGGCTGGGGAAACCTCACGGGGGAGGCCT
TGGACCGGTACCTCGTGGACCTGGCGGGCCAGATCGGCCTGGAGGAAGGGGCCTTCGCGGCCTGCCTCGCCTCGGGCCGG
CACCGGGAGGAGGTCCTCGCCGACCAGAAGCTCGCCACCGACCTCGGCCTCACCGGCACCCCCACCTTCTTCATCGCCGG
GGAAAAGCACACGGGCTTCCTCCCCTACGAGGAGTGGAAGCGGCTCCTGGACGAGGCCTTGGCCAAGGCAGAGTAG

Upstream 100 bases:

>100_bases
TTGGGCCAGAACGGCTGGCCCGGGGAAGCCCCCCGGGAACTTTTTCCGGGGGGTGGGACGACGCCCTCCGCGGCCAGGCC
GCACGTGGTAGAGTAACCCC

Downstream 100 bases:

>100_bases
CGCCTTAAGGAGGCCGGGAAAGGCGTCTGGTACCCTGAAAGCGTGGAAGCGCTTTGGGTGACCGCCGCCTTCGCCTTGGG
CCTCCTGGCGAGCCGCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Disulfide oxidoreductase D; Thiol-disulfide oxidoreductase D [H]

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MPRAIVLVVLGLALLGLGWILWGPKGKAGLDPAEGARFALGREDAPVVVVDFSNYLCPHCQNHALNVLPRLKAEYIDTGK
VRYLFRDFPFPGQANVIRASEAAACAAEQGRYYDYHEVLFRAAAGWGNLTGEALDRYLVDLAGQIGLEEGAFAACLASGR
HREEVLADQKLATDLGLTGTPTFFIAGEKHTGFLPYEEWKRLLDEALAKAE

Sequences:

>Translated_211_residues
MPRAIVLVVLGLALLGLGWILWGPKGKAGLDPAEGARFALGREDAPVVVVDFSNYLCPHCQNHALNVLPRLKAEYIDTGK
VRYLFRDFPFPGQANVIRASEAAACAAEQGRYYDYHEVLFRAAAGWGNLTGEALDRYLVDLAGQIGLEEGAFAACLASGR
HREEVLADQKLATDLGLTGTPTFFIAGEKHTGFLPYEEWKRLLDEALAKAE
>Mature_210_residues
PRAIVLVVLGLALLGLGWILWGPKGKAGLDPAEGARFALGREDAPVVVVDFSNYLCPHCQNHALNVLPRLKAEYIDTGKV
RYLFRDFPFPGQANVIRASEAAACAAEQGRYYDYHEVLFRAAAGWGNLTGEALDRYLVDLAGQIGLEEGAFAACLASGRH
REEVLADQKLATDLGLTGTPTFFIAGEKHTGFLPYEEWKRLLDEALAKAE

Specific function: May be required for disulfide bond formation in some proteins [H]

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioredoxin family. DsbA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 23017; Mature: 22885

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAIVLVVLGLALLGLGWILWGPKGKAGLDPAEGARFALGREDAPVVVVDFSNYLCPHC
CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCC
QNHALNVLPRLKAEYIDTGKVRYLFRDFPFPGQANVIRASEAAACAAEQGRYYDYHEVLF
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHH
RAAAGWGNLTGEALDRYLVDLAGQIGLEEGAFAACLASGRHREEVLADQKLATDLGLTGT
HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
PTFFIAGEKHTGFLPYEEWKRLLDEALAKAE
CEEEEECCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRAIVLVVLGLALLGLGWILWGPKGKAGLDPAEGARFALGREDAPVVVVDFSNYLCPHC
CHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCC
QNHALNVLPRLKAEYIDTGKVRYLFRDFPFPGQANVIRASEAAACAAEQGRYYDYHEVLF
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHH
RAAAGWGNLTGEALDRYLVDLAGQIGLEEGAFAACLASGRHREEVLADQKLATDLGLTGT
HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
PTFFIAGEKHTGFLPYEEWKRLLDEALAKAE
CEEEEECCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]