| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55980772
Identifier: 55980772
GI number: 55980772
Start: 767533
End: 768348
Strand: Reverse
Name: 55980772
Synonym: TTHA0803
Alternate gene names: NA
Gene position: 768348-767533 (Counterclockwise)
Preceding gene: 55980773
Following gene: 55980771
Centisome position: 41.54
GC content: 68.63
Gene sequence:
>816_bases GTGAGGCCCTACGTCCTGGGCCTTCCCCGCTACGCCAACGTCGCCCCCCTCCACCACTTCCTGAGGCTCGAGGGCTTCCG GGTTCTCCACGCCGTCCCCGCAGAGCTCAACCGCCTCCTCCTCTCGGGGGAGGTGGGGCTTTCCCTGGTCTCCAGCTACT TCTACCTCAAGCACCAGGACAGCCTGGGCCTCCTCCCCGACTTCTCCGTGGCCGTCCTGGGAAGGGTCTACTCGGTGAAC CTCTTTCACAAGGGAGCCCTCCCCCACCTTGCCCGCGTGGCCCTCACCACGGAGAGCGCCACCAGCGTGGCCCTCCTGAA GCTCCTTCTGAAGGAGGCCGGGGCCGGGCCCCGCTACGAACGGCGGGAGGGGGGGCTGGAGCTCCTTTCCGCTTACGACG GCGTCCTTCTCATCGGCGACCGGGCCATAAAGGCCTACGCCGCCCTTCTTCCGGAAGTCCCGGAAACGCCCCACGCCCTC CCCACCCGCTTCGGGGAGGTGGAGGTGGCGGACCTCTCCACCCTGTGGTTTCAAAGGACCCACCTCCCCTTCGTCTTCGC CGTCTGGGCCTACAGGCGGGAAAACCCTCCCCCCAAGGCCCTGGTGCAAGCCCTTAGGGAGGCCCGGCGGGAGGGCCTGG GGCGGCTTAGGGAGGTGGCCGAGGCCGAGGCCCGCAGGCTCGGCGTCCACCCCCTCCTCCTCCAGCACTACCTCTGGAAC TTCCGCTACCACCTGGAGGAGCCCGACCGCCTGGGGCTTAAGGCCTTCGCCGAGGCCCTCGGCCTCCCCTTCGCCCCTAT GTTCTATCCTGAGTAG
Upstream 100 bases:
>100_bases CCAAGCGGGAGCTCGCCCGCATCATCCTCATGGCGGGGCGGATCCCCGTGGAGCGGGACGCCCTCTACCGGGAGGTGCGG GTCTGGGACCGGGTGGAGGC
Downstream 100 bases:
>100_bases CGCTTGACATCATAAAGCGCTTGAGGTATCATCCCACCTGGGCGCAAGGCCCAGAGGAGGTGCGCATGCGTTGGAACCTT GACCCGACCCACACCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MRPYVLGLPRYANVAPLHHFLRLEGFRVLHAVPAELNRLLLSGEVGLSLVSSYFYLKHQDSLGLLPDFSVAVLGRVYSVN LFHKGALPHLARVALTTESATSVALLKLLLKEAGAGPRYERREGGLELLSAYDGVLLIGDRAIKAYAALLPEVPETPHAL PTRFGEVEVADLSTLWFQRTHLPFVFAVWAYRRENPPPKALVQALREARREGLGRLREVAEAEARRLGVHPLLLQHYLWN FRYHLEEPDRLGLKAFAEALGLPFAPMFYPE
Sequences:
>Translated_271_residues MRPYVLGLPRYANVAPLHHFLRLEGFRVLHAVPAELNRLLLSGEVGLSLVSSYFYLKHQDSLGLLPDFSVAVLGRVYSVN LFHKGALPHLARVALTTESATSVALLKLLLKEAGAGPRYERREGGLELLSAYDGVLLIGDRAIKAYAALLPEVPETPHAL PTRFGEVEVADLSTLWFQRTHLPFVFAVWAYRRENPPPKALVQALREARREGLGRLREVAEAEARRLGVHPLLLQHYLWN FRYHLEEPDRLGLKAFAEALGLPFAPMFYPE >Mature_271_residues MRPYVLGLPRYANVAPLHHFLRLEGFRVLHAVPAELNRLLLSGEVGLSLVSSYFYLKHQDSLGLLPDFSVAVLGRVYSVN LFHKGALPHLARVALTTESATSVALLKLLLKEAGAGPRYERREGGLELLSAYDGVLLIGDRAIKAYAALLPEVPETPHAL PTRFGEVEVADLSTLWFQRTHLPFVFAVWAYRRENPPPKALVQALREARREGLGRLREVAEAEARRLGVHPLLLQHYLWN FRYHLEEPDRLGLKAFAEALGLPFAPMFYPE
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30454; Mature: 30454
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPYVLGLPRYANVAPLHHFLRLEGFRVLHAVPAELNRLLLSGEVGLSLVSSYFYLKHQD CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECC SLGLLPDFSVAVLGRVYSVNLFHKGALPHLARVALTTESATSVALLKLLLKEAGAGPRYE CCCCCCCHHHHHHHHHHHEEEHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCH RREGGLELLSAYDGVLLIGDRAIKAYAALLPEVPETPHALPTRFGEVEVADLSTLWFQRT HHHCCHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH HLPFVFAVWAYRRENPPPKALVQALREARREGLGRLREVAEAEARRLGVHPLLLQHYLWN CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FRYHLEEPDRLGLKAFAEALGLPFAPMFYPE HHCCCCCCHHCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRPYVLGLPRYANVAPLHHFLRLEGFRVLHAVPAELNRLLLSGEVGLSLVSSYFYLKHQD CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECC SLGLLPDFSVAVLGRVYSVNLFHKGALPHLARVALTTESATSVALLKLLLKEAGAGPRYE CCCCCCCHHHHHHHHHHHEEEHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCH RREGGLELLSAYDGVLLIGDRAIKAYAALLPEVPETPHALPTRFGEVEVADLSTLWFQRT HHHCCHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH HLPFVFAVWAYRRENPPPKALVQALREARREGLGRLREVAEAEARRLGVHPLLLQHYLWN CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FRYHLEEPDRLGLKAFAEALGLPFAPMFYPE HHCCCCCCHHCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA