Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is yunF [H]

Identifier: 55980727

GI number: 55980727

Start: 724526

End: 725437

Strand: Reverse

Name: yunF [H]

Synonym: TTHA0758

Alternate gene names: 55980727

Gene position: 725437-724526 (Counterclockwise)

Preceding gene: 55980728

Following gene: 55980726

Centisome position: 39.22

GC content: 68.09

Gene sequence:

>912_bases
GTGGCCGAGATCCGCGTGGGCACGGCCAGCTGGACCGACCCCACCCTCCTCGCCTCCGGCTGGTACCCCCCCGGGGTGAG
GAACCACCCGGAAAGGCGCCTCCGCTACTACGCCCAGCACTTTGATACCGTGGAGGTGGACAGCACCTTCTACGCCCTCC
CCCGCCTCGAGGTGGTGCGGAAGTGGGCGGAGAGGACCCCTGAGGGCTTCCTCTTCCACGTCAAGGCCTACTCCGCCTTC
ACCGGGCACGGCCTCGAGGCCAGTGCCCTCCCCAAGGACCTGCAGGCCCTCCTCCCCCAAAAGGAGGGCCACCTCTCCCA
GCGGGAGGTGCCGGAGGAGGTGGTGGAGGAAGCCTGGAACCGCTTCTTTGCGTCCCTCGCCCCCTTAAGGGAGGCAGGGA
AACTGGGCTACCTCCACTTCGGCCTCCCCCCCTGGACCGAGCCCAAGCCCCGGAGCTTCCGGTACCTGGAGCGGCTGGCG
GAGAGAACCCAGGGCTACCTGGTGGCCGTGGAGTTCCGCAACCCCAGGTGGTACACCGCGTGGGGCTTTGTGAAGCGGGA
GCTCATGCGCCTCGGCCTGGCCCACGTGAGCGTGGACGCCCCGCCCCACCCCGAGGCCCCGCCCAGGGTCTTGGAGCCCA
CCCGGGAGGTGGCCGTCCTCCGCTGCCACGGGAGGAACGCCGAAACCTGGAAGGGGCCTCACCAAAAGCCCTACGAGCGC
TTCAACTGGCGCTACTCCGAGGAGGAGCTTTTGGACCTGGCGGAGGCCACCCGCACCCTGGCCGCTCAAGCGGAAAGGGT
CTTCGTCATCTTCAACAACAACTACGGCACCCAGGGGGTGGAGGCCGCCTTGGGACTCAAGCGCCTTTTGGGTCTTGGGA
AGCCTCCCTGGGCCGAAGGGCCATTTTCTTAG

Upstream 100 bases:

>100_bases
CTACCGGGAGATCAAAAGCCCCCACGGGCACGACGCCTTCCTCATAGAGACCGACCAGGTGGAGGAGATCCTGGACGCCT
TCCTCCCGTAGACTGGGGCC

Downstream 100 bases:

>100_bases
ACCAAGTCCAGGACATTTGTCCCCGGGACCGCCGCCTAGACTCCTCTTCGCATGGAGCTAGGTTTGCTTTCGGAAAGAAG
AGGCCTTTCCAGGGAGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MAEIRVGTASWTDPTLLASGWYPPGVRNHPERRLRYYAQHFDTVEVDSTFYALPRLEVVRKWAERTPEGFLFHVKAYSAF
TGHGLEASALPKDLQALLPQKEGHLSQREVPEEVVEEAWNRFFASLAPLREAGKLGYLHFGLPPWTEPKPRSFRYLERLA
ERTQGYLVAVEFRNPRWYTAWGFVKRELMRLGLAHVSVDAPPHPEAPPRVLEPTREVAVLRCHGRNAETWKGPHQKPYER
FNWRYSEEELLDLAEATRTLAAQAERVFVIFNNNYGTQGVEAALGLKRLLGLGKPPWAEGPFS

Sequences:

>Translated_303_residues
MAEIRVGTASWTDPTLLASGWYPPGVRNHPERRLRYYAQHFDTVEVDSTFYALPRLEVVRKWAERTPEGFLFHVKAYSAF
TGHGLEASALPKDLQALLPQKEGHLSQREVPEEVVEEAWNRFFASLAPLREAGKLGYLHFGLPPWTEPKPRSFRYLERLA
ERTQGYLVAVEFRNPRWYTAWGFVKRELMRLGLAHVSVDAPPHPEAPPRVLEPTREVAVLRCHGRNAETWKGPHQKPYER
FNWRYSEEELLDLAEATRTLAAQAERVFVIFNNNYGTQGVEAALGLKRLLGLGKPPWAEGPFS
>Mature_302_residues
AEIRVGTASWTDPTLLASGWYPPGVRNHPERRLRYYAQHFDTVEVDSTFYALPRLEVVRKWAERTPEGFLFHVKAYSAFT
GHGLEASALPKDLQALLPQKEGHLSQREVPEEVVEEAWNRFFASLAPLREAGKLGYLHFGLPPWTEPKPRSFRYLERLAE
RTQGYLVAVEFRNPRWYTAWGFVKRELMRLGLAHVSVDAPPHPEAPPRVLEPTREVAVLRCHGRNAETWKGPHQKPYERF
NWRYSEEELLDLAEATRTLAAQAERVFVIFNNNYGTQGVEAALGLKRLLGLGKPPWAEGPFS

Specific function: Unknown

COG id: COG1801

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0759 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002763 [H]

Pfam domain/function: PF01904 DUF72 [H]

EC number: NA

Molecular weight: Translated: 34754; Mature: 34623

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIRVGTASWTDPTLLASGWYPPGVRNHPERRLRYYAQHFDTVEVDSTFYALPRLEVVR
CCEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH
KWAERTPEGFLFHVKAYSAFTGHGLEASALPKDLQALLPQKEGHLSQREVPEEVVEEAWN
HHHHCCCCCEEEEEEEECHHCCCCCCHHCCHHHHHHHCCCCCCCCCHHCCHHHHHHHHHH
RFFASLAPLREAGKLGYLHFGLPPWTEPKPRSFRYLERLAERTQGYLVAVEFRNPRWYTA
HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEH
WGFVKRELMRLGLAHVSVDAPPHPEAPPRVLEPTREVAVLRCHGRNAETWKGPHQKPYER
HHHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHH
FNWRYSEEELLDLAEATRTLAAQAERVFVIFNNNYGTQGVEAALGLKRLLGLGKPPWAEG
CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
PFS
CCC
>Mature Secondary Structure 
AEIRVGTASWTDPTLLASGWYPPGVRNHPERRLRYYAQHFDTVEVDSTFYALPRLEVVR
CEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH
KWAERTPEGFLFHVKAYSAFTGHGLEASALPKDLQALLPQKEGHLSQREVPEEVVEEAWN
HHHHCCCCCEEEEEEEECHHCCCCCCHHCCHHHHHHHCCCCCCCCCHHCCHHHHHHHHHH
RFFASLAPLREAGKLGYLHFGLPPWTEPKPRSFRYLERLAERTQGYLVAVEFRNPRWYTA
HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEH
WGFVKRELMRLGLAHVSVDAPPHPEAPPRVLEPTREVAVLRCHGRNAETWKGPHQKPYER
HHHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHH
FNWRYSEEELLDLAEATRTLAAQAERVFVIFNNNYGTQGVEAALGLKRLLGLGKPPWAEG
CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
PFS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]