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The map label for this gene is 54295559

Identifier: 54295559

GI number: 54295559

Start: 3016605

End: 3018167

Strand: Reverse

Name: 54295559

Synonym: lpl2646

Alternate gene names: NA

Gene position: 3018167-3016605 (Counterclockwise)

Preceding gene: 54295563

Following gene: 54295556

Centisome position: 90.21

GC content: 36.4

Gene sequence:

>1563_bases
ATGCCAAAACGTCTCATTAACAAGAATATCGATATATATAATTATCCTAATGAATTCGAAGATAATTTAGGTTCCATTTC
ACTGGGCGACTTGCATGGCAATGCAATCAAGCTTATCCATTTTCTTTTCCGTCATAAAATAATTAAATTTAAACCAGAGA
TTAGCAATTTCCACGAAGCTTACCGGCAATTTGTAACAATTTATGAACAATATGACGATATAGTTCAAGAGTATTTGGAA
ATTCGTACGCTTCTTCAATTGATACAAATAAAAATAACTAACGCACAGCAAAGAATTTTAGACATTGAGCAAAAATTATC
ACTTGCGACAGACCATCAGAAAGAGTTTTCTCAATCATTATTGCAACTTAAGAAGCCAATAGAGGCCAATTTACAAATGG
CTGAAAAGAGTAAATCTGGCCTGGAAGAAAAATTAAGTGGGCTGAAAACAAGGCTGCCATCATGTATTGAGCGATTTAAT
AAGTTCATGACGCAGATAGAAATTAATGATATTAAAACGCTTATTCGATTGCTGGGTGATGAGGTGGCCGATCGGGGGAG
TTGTGATTATTTCACTTTAAGAATACTGAACTTCCTTTATCAAAATCAGATTGCAATCAAGATCATTTTATCCAATCATG
GGTACGAGTTTATTCATGCTTATGAAAAACTTGTAGTCGGTCAACCATTTAAACCCAAAGGTTATATTGGGGATATACAA
ATTAAATCATTCTGGGGTCTCCAATTATTACTGGAGCAAAGTGCCATTACTCAGGAGGAATTGAGAAGTTTAGTTGAGAG
AGCTTATAAACCAACTTTAAAAATTATCGATTACTCTCTAAGCGAGGACGGTATTACCTTGTATAGCCATGCTCCCATAC
GCTTTGATAGCATTCGAATGGCAGCTTCTCAGTTGGGTGTCATTTATAATGATTCCACCAAAGAAGCATTGGCTGAAACC
ATAGACCAACTTAATGCCCAATTGCAAATTTATATGAAGAACAACATGCTGCATTTGTTATTTGAGAATAATGAAATTAA
CGATCCAACCAATATGACTGATGAAGAGAGAAACGCATCGCCGTTAATTTATTTAGTATGGAATCGCTGGAATGAAAGCA
AAGAAGTAGAGAATGCTCGACCAGGAAAATACAATGGCTATTTTGTCACGTATGTTCATGGGCATGATCCTTTTCAAAGC
CCATTAACTTATGTGTATAACCTGGATACTCTGTGTGGAAAATGCTCAAGAGTGGGTGAGGAAGAGCAAATTAACAAGGC
CTTCCAGTTTTTGACAGAAAATCGACACACCAATGTGGATAAAACAGCAAGTGAAAGCCTTCTTCGCAATATATCAAGGT
ATAAAGTGCTGGATTCGGATGAAAACACTTTAAAACACAAAATCCCTAAGACGTCACTTGCATTGGCAACAGATATTCTC
GATTGTAAAATTAAGGAGAGTTTAATAAAACTGAGCTTGCTCGGGAAACCAAAAGCTGTATCAGGTTCGCTTGGTGTAGA
CCAGAATACTTCTATTCCTAATCAGGTGTCTCTGGGCAAATGA

Upstream 100 bases:

>100_bases
TTTAATACTTCCATGTTATTACATGAAAAGTGAATATTTGTTATTGTCGACTTTGAGTATGCCCTTATTTTGAAGGGGAG
TTTTTTACATGGACTAGGGA

Downstream 100 bases:

>100_bases
CCGACTCTCTATGAAGCACTGAGTTTTAGAGATAGCCATAAAATGCGCACAAAATGCTTCGAAAAAATTGAGGTACGTAA
GTAGATTATCGAGCTCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MPKRLINKNIDIYNYPNEFEDNLGSISLGDLHGNAIKLIHFLFRHKIIKFKPEISNFHEAYRQFVTIYEQYDDIVQEYLE
IRTLLQLIQIKITNAQQRILDIEQKLSLATDHQKEFSQSLLQLKKPIEANLQMAEKSKSGLEEKLSGLKTRLPSCIERFN
KFMTQIEINDIKTLIRLLGDEVADRGSCDYFTLRILNFLYQNQIAIKIILSNHGYEFIHAYEKLVVGQPFKPKGYIGDIQ
IKSFWGLQLLLEQSAITQEELRSLVERAYKPTLKIIDYSLSEDGITLYSHAPIRFDSIRMAASQLGVIYNDSTKEALAET
IDQLNAQLQIYMKNNMLHLLFENNEINDPTNMTDEERNASPLIYLVWNRWNESKEVENARPGKYNGYFVTYVHGHDPFQS
PLTYVYNLDTLCGKCSRVGEEEQINKAFQFLTENRHTNVDKTASESLLRNISRYKVLDSDENTLKHKIPKTSLALATDIL
DCKIKESLIKLSLLGKPKAVSGSLGVDQNTSIPNQVSLGK

Sequences:

>Translated_520_residues
MPKRLINKNIDIYNYPNEFEDNLGSISLGDLHGNAIKLIHFLFRHKIIKFKPEISNFHEAYRQFVTIYEQYDDIVQEYLE
IRTLLQLIQIKITNAQQRILDIEQKLSLATDHQKEFSQSLLQLKKPIEANLQMAEKSKSGLEEKLSGLKTRLPSCIERFN
KFMTQIEINDIKTLIRLLGDEVADRGSCDYFTLRILNFLYQNQIAIKIILSNHGYEFIHAYEKLVVGQPFKPKGYIGDIQ
IKSFWGLQLLLEQSAITQEELRSLVERAYKPTLKIIDYSLSEDGITLYSHAPIRFDSIRMAASQLGVIYNDSTKEALAET
IDQLNAQLQIYMKNNMLHLLFENNEINDPTNMTDEERNASPLIYLVWNRWNESKEVENARPGKYNGYFVTYVHGHDPFQS
PLTYVYNLDTLCGKCSRVGEEEQINKAFQFLTENRHTNVDKTASESLLRNISRYKVLDSDENTLKHKIPKTSLALATDIL
DCKIKESLIKLSLLGKPKAVSGSLGVDQNTSIPNQVSLGK
>Mature_519_residues
PKRLINKNIDIYNYPNEFEDNLGSISLGDLHGNAIKLIHFLFRHKIIKFKPEISNFHEAYRQFVTIYEQYDDIVQEYLEI
RTLLQLIQIKITNAQQRILDIEQKLSLATDHQKEFSQSLLQLKKPIEANLQMAEKSKSGLEEKLSGLKTRLPSCIERFNK
FMTQIEINDIKTLIRLLGDEVADRGSCDYFTLRILNFLYQNQIAIKIILSNHGYEFIHAYEKLVVGQPFKPKGYIGDIQI
KSFWGLQLLLEQSAITQEELRSLVERAYKPTLKIIDYSLSEDGITLYSHAPIRFDSIRMAASQLGVIYNDSTKEALAETI
DQLNAQLQIYMKNNMLHLLFENNEINDPTNMTDEERNASPLIYLVWNRWNESKEVENARPGKYNGYFVTYVHGHDPFQSP
LTYVYNLDTLCGKCSRVGEEEQINKAFQFLTENRHTNVDKTASESLLRNISRYKVLDSDENTLKHKIPKTSLALATDILD
CKIKESLIKLSLLGKPKAVSGSLGVDQNTSIPNQVSLGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59894; Mature: 59763

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRLINKNIDIYNYPNEFEDNLGSISLGDLHGNAIKLIHFLFRHKIIKFKPEISNFHEA
CCCHHHCCCCCEEECCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHEECCCHHHHHHH
YRQFVTIYEQYDDIVQEYLEIRTLLQLIQIKITNAQQRILDIEQKLSLATDHQKEFSQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LQLKKPIEANLQMAEKSKSGLEEKLSGLKTRLPSCIERFNKFMTQIEINDIKTLIRLLGD
HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH
EVADRGSCDYFTLRILNFLYQNQIAIKIILSNHGYEFIHAYEKLVVGQPFKPKGYIGDIQ
HHHCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEE
IKSFWGLQLLLEQSAITQEELRSLVERAYKPTLKIIDYSLSEDGITLYSHAPIRFDSIRM
EEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCHHHHHH
AASQLGVIYNDSTKEALAETIDQLNAQLQIYMKNNMLHLLFENNEINDPTNMTDEERNAS
HHHHCCEEECCCHHHHHHHHHHHHCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCC
PLIYLVWNRWNESKEVENARPGKYNGYFVTYVHGHDPFQSPLTYVYNLDTLCGKCSRVGE
CEEEEEEECCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
EEQINKAFQFLTENRHTNVDKTASESLLRNISRYKVLDSDENTLKHKIPKTSLALATDIL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHCCCCHHHHHHHHHH
DCKIKESLIKLSLLGKPKAVSGSLGVDQNTSIPNQVSLGK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKRLINKNIDIYNYPNEFEDNLGSISLGDLHGNAIKLIHFLFRHKIIKFKPEISNFHEA
CCHHHCCCCCEEECCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHEECCCHHHHHHH
YRQFVTIYEQYDDIVQEYLEIRTLLQLIQIKITNAQQRILDIEQKLSLATDHQKEFSQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LQLKKPIEANLQMAEKSKSGLEEKLSGLKTRLPSCIERFNKFMTQIEINDIKTLIRLLGD
HHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH
EVADRGSCDYFTLRILNFLYQNQIAIKIILSNHGYEFIHAYEKLVVGQPFKPKGYIGDIQ
HHHCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEE
IKSFWGLQLLLEQSAITQEELRSLVERAYKPTLKIIDYSLSEDGITLYSHAPIRFDSIRM
EEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCHHHHHH
AASQLGVIYNDSTKEALAETIDQLNAQLQIYMKNNMLHLLFENNEINDPTNMTDEERNAS
HHHHCCEEECCCHHHHHHHHHHHHCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCC
PLIYLVWNRWNESKEVENARPGKYNGYFVTYVHGHDPFQSPLTYVYNLDTLCGKCSRVGE
CEEEEEEECCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
EEQINKAFQFLTENRHTNVDKTASESLLRNISRYKVLDSDENTLKHKIPKTSLALATDIL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHHHCCCCHHHHHHHHHH
DCKIKESLIKLSLLGKPKAVSGSLGVDQNTSIPNQVSLGK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA