Click here to switch to the map view.

The map label for this gene is pheS [H]

Identifier: 54295552

GI number: 54295552

Start: 3010094

End: 3011110

Strand: Reverse

Name: pheS [H]

Synonym: lpl2639

Alternate gene names: 54295552

Gene position: 3011110-3010094 (Counterclockwise)

Preceding gene: 54295553

Following gene: 54295551

Centisome position: 90.0

GC content: 40.51

Gene sequence:

>1017_bases
ATGTTGGTACTTATAAACACCATACAAGAACAAGCTTCAGAAGCAATCAAACAAGCCACGGATATAGTTGCTCTTGAACA
AATTCGTGTTGATTTTTTGGGCAAGAAAGGCAAGCTCACCGAATTGCTAAAAGGACTTGCTAATTTGTCTGCAGAGGAAA
AACCCAAGGTAGGTCAATTGGTCAATCAAGCAAAGCAGGGAATTAGTGCTTTGATTGAAACAAAAATGATCGAATTGAAA
GAAAAGCAATTATTAGCCAAGCTGGCAGCAGAGCAAATCGACGTTACTCTTCCAGGTCGCAATCATTCCACAGGTTCCCT
ACATCCTGTTACTCAGGTAAAGCATAGAATTAATGATTATTTTAGTCGTTTAGGATTTGATATTGTTGAAGGTCCTGAAA
TTGAAACAGAATTTTATAATTTTGAAGCATTAAATATCCCTGGTCATCATCCTGCACGTGCGATGCACGATACCTTTTAT
TTTGGAGACGGGCGCTTGTTGAGGACACACACCTCTCCTGTACAAATCAGGACAATGGAGCAGCGTAAGCCACCTTTTCG
TTTAATTGCTCCTGGCCGAGTTTATCGTTGTGATTCGGATGTAACCCATACCCCTATGTTTCATCAAGTGGAGGGATTAC
TCATCGATAAGCAAGCCACTTTGGCCGGGTTAAAGGGTTTGTTGCAAGATTTCTTCTCTTATTTTTTTGGTCGGGAATTG
GCATTAAGATTCAGACCTTCCTATTTCCCTTTTACCGAACCTTCCGCAGAAGTAGATATAGAATGTACTCAATGTAATGG
TAAGGGCTGCCGCTCTTGCAAGTTTACAGGCTGGCTTGAGGTATTGGGTTGTGGTATGGTCCACCCTAACGTTTTAATCG
CAGTGAACATTGATCCGAATGAGTATCATGGATGGGCTTTTGGCATGGGTATGGACAGATTGGCAATGCTTTATTATGGC
ATAGATGATTTGCGTATGTTATTTGAAAATGATTTAACTTTTTTACGGCAGTTTTAA

Upstream 100 bases:

>100_bases
ATAAATCTCAATTCGGAATAGCAATCTTAAATAAAAGCCGGTTTGTAAAATAAAAATTATTGAGGAGGCTAAGGCCTCCT
TTTTACTTGTGGGTAGAACT

Downstream 100 bases:

>100_bases
CCATTATAAAAATAATGAGTCCCAGATTTTATTTTTATGTTTCTTTATGATTGTCTTTCATATGGTACATAAATGATAAA
GATTAGACCAAATTGTAGTC

Product: phenylalanyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase alpha chain; PheRS [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLVLINTIQEQASEAIKQATDIVALEQIRVDFLGKKGKLTELLKGLANLSAEEKPKVGQLVNQAKQGISALIETKMIELK
EKQLLAKLAAEQIDVTLPGRNHSTGSLHPVTQVKHRINDYFSRLGFDIVEGPEIETEFYNFEALNIPGHHPARAMHDTFY
FGDGRLLRTHTSPVQIRTMEQRKPPFRLIAPGRVYRCDSDVTHTPMFHQVEGLLIDKQATLAGLKGLLQDFFSYFFGREL
ALRFRPSYFPFTEPSAEVDIECTQCNGKGCRSCKFTGWLEVLGCGMVHPNVLIAVNIDPNEYHGWAFGMGMDRLAMLYYG
IDDLRMLFENDLTFLRQF

Sequences:

>Translated_338_residues
MLVLINTIQEQASEAIKQATDIVALEQIRVDFLGKKGKLTELLKGLANLSAEEKPKVGQLVNQAKQGISALIETKMIELK
EKQLLAKLAAEQIDVTLPGRNHSTGSLHPVTQVKHRINDYFSRLGFDIVEGPEIETEFYNFEALNIPGHHPARAMHDTFY
FGDGRLLRTHTSPVQIRTMEQRKPPFRLIAPGRVYRCDSDVTHTPMFHQVEGLLIDKQATLAGLKGLLQDFFSYFFGREL
ALRFRPSYFPFTEPSAEVDIECTQCNGKGCRSCKFTGWLEVLGCGMVHPNVLIAVNIDPNEYHGWAFGMGMDRLAMLYYG
IDDLRMLFENDLTFLRQF
>Mature_338_residues
MLVLINTIQEQASEAIKQATDIVALEQIRVDFLGKKGKLTELLKGLANLSAEEKPKVGQLVNQAKQGISALIETKMIELK
EKQLLAKLAAEQIDVTLPGRNHSTGSLHPVTQVKHRINDYFSRLGFDIVEGPEIETEFYNFEALNIPGHHPARAMHDTFY
FGDGRLLRTHTSPVQIRTMEQRKPPFRLIAPGRVYRCDSDVTHTPMFHQVEGLLIDKQATLAGLKGLLQDFFSYFFGREL
ALRFRPSYFPFTEPSAEVDIECTQCNGKGCRSCKFTGWLEVLGCGMVHPNVLIAVNIDPNEYHGWAFGMGMDRLAMLYYG
IDDLRMLFENDLTFLRQF

Specific function: Unknown

COG id: COG0016

COG function: function code J; Phenylalanyl-tRNA synthetase alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha chain type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI5729820, Length=290, Percent_Identity=31.7241379310345, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI4758340, Length=272, Percent_Identity=31.6176470588235, Blast_Score=121, Evalue=8e-28,
Organism=Escherichia coli, GI1788007, Length=327, Percent_Identity=57.7981651376147, Blast_Score=390, Evalue=1e-110,
Organism=Caenorhabditis elegans, GI32563657, Length=274, Percent_Identity=30.2919708029197, Blast_Score=127, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17508957, Length=274, Percent_Identity=30.2919708029197, Blast_Score=127, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI32566635, Length=285, Percent_Identity=31.9298245614035, Blast_Score=127, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6321087, Length=271, Percent_Identity=29.8892988929889, Blast_Score=122, Evalue=8e-29,
Organism=Saccharomyces cerevisiae, GI6325304, Length=101, Percent_Identity=40.5940594059406, Blast_Score=87, Evalue=3e-18,
Organism=Drosophila melanogaster, GI18858079, Length=307, Percent_Identity=28.0130293159609, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI17137424, Length=299, Percent_Identity=28.0936454849498, Blast_Score=104, Evalue=7e-23,

Paralogues:

None

Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006195
- InterPro:   IPR004529
- InterPro:   IPR004188
- InterPro:   IPR022911
- InterPro:   IPR002319
- InterPro:   IPR010978 [H]

Pfam domain/function: PF02912 Phe_tRNA-synt_N; PF01409 tRNA-synt_2d [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 38295; Mature: 38295

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS50862 AA_TRNA_LIGASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLINTIQEQASEAIKQATDIVALEQIRVDFLGKKGKLTELLKGLANLSAEEKPKVGQL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHH
VNQAKQGISALIETKMIELKEKQLLAKLAAEQIDVTLPGRNHSTGSLHPVTQVKHRINDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHH
FSRLGFDIVEGPEIETEFYNFEALNIPGHHPARAMHDTFYFGDGRLLRTHTSPVQIRTME
HHHCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHCEEEECCCEEEEECCCCEEEEEHH
QRKPPFRLIAPGRVYRCDSDVTHTPMFHQVEGLLIDKQATLAGLKGLLQDFFSYFFGREL
HCCCCEEEECCCEEEECCCCCCCCCHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCE
ALRFRPSYFPFTEPSAEVDIECTQCNGKGCRSCKFTGWLEVLGCGMVHPNVLIAVNIDPN
EEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCC
EYHGWAFGMGMDRLAMLYYGIDDLRMLFENDLTFLRQF
CCCCEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVLINTIQEQASEAIKQATDIVALEQIRVDFLGKKGKLTELLKGLANLSAEEKPKVGQL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHH
VNQAKQGISALIETKMIELKEKQLLAKLAAEQIDVTLPGRNHSTGSLHPVTQVKHRINDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHH
FSRLGFDIVEGPEIETEFYNFEALNIPGHHPARAMHDTFYFGDGRLLRTHTSPVQIRTME
HHHCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHCEEEECCCEEEEECCCCEEEEEHH
QRKPPFRLIAPGRVYRCDSDVTHTPMFHQVEGLLIDKQATLAGLKGLLQDFFSYFFGREL
HCCCCEEEECCCEEEECCCCCCCCCHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCE
ALRFRPSYFPFTEPSAEVDIECTQCNGKGCRSCKFTGWLEVLGCGMVHPNVLIAVNIDPN
EEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCC
EYHGWAFGMGMDRLAMLYYGIDDLRMLFENDLTFLRQF
CCCCEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA