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The map label for this gene is petC [H]

Identifier: 54295544

GI number: 54295544

Start: 3002879

End: 3003619

Strand: Reverse

Name: petC [H]

Synonym: lpl2631

Alternate gene names: 54295544

Gene position: 3003619-3002879 (Counterclockwise)

Preceding gene: 54295545

Following gene: 54295543

Centisome position: 89.78

GC content: 35.09

Gene sequence:

>741_bases
ATGATGAAAATAAAGGTGTTATTAGTTGCTGCATTGGCATTTTTAATGTCAAACGCTGCTTTTACAGAAAATTTAACAAT
GGATTATGTACCGGTTGATATAAACGATAAAGAGAGTTTGCAAAGAGGGGCAAAGATGTTTATGAATTATTGCTCGGGAT
GCCATTCTCTCAAATACATGCGTTATAACCGCATGGCTCAAGATCTTGGATTAACTACTTTTGATGGTCAGATTGCTGAA
AATTTATTAAAAAATAACTTAATTTTTACTCAGGCCACTATTTATGATCCCATTCAAATAGCCATGTCGCCTGAAGATGC
CAAGCAATGGTTTGGTATGGTGCCTCCCGATTTGTCTTTAAGTGCGCGGGATAGAGGGCCTGTTTGGATATATAATTATT
TGAAAAGTTTTTACAGCGACCCTTCCAGACCTTTTGGTGCTAATAATTTACTAATGCCTGATGTTGCTATGCCTAATGTT
TTGGAACCCTTGATTGGAAAAGTCATTTTGGTCAAAGATAAAAATTCGCATGCAAATAGTTTATTAGTGGTGAAACGAGG
TGAGATGTTTGAAGGCCAATTTGACAGCGCATTAAAGGATTTAGTCAATTTTTTGGTTTATGTAGGTGAGCCTGCCAAAC
TAATTCGTTATAAATTAGGAGTTTTTGTTCTTTTGTTCTTTTGTATTTTCCTTATAGCAGCTTATTCACTGAAGAAAGCT
TATTGGAAACAATTAAAATAG

Upstream 100 bases:

>100_bases
CTCGAATTGCCGCTGTTATTTATTTTTCTTACTTTATCTTGATGCCTATTTATAGTCGTTTTGAGAAAACCCGGCCAGTA
CCTACACGGATAGGTGAAAA

Downstream 100 bases:

>100_bases
GAATAGGTCGCTGACTCCCCAGTTTTGTAAAAAGTACTGCATTTTTGCCTTTTATACAGAGTTCAATCTCAAATGGTTGC
CTTCAGAATCAGAAAATATA

Product: hypothetical protein

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MMKIKVLLVAALAFLMSNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMRYNRMAQDLGLTTFDGQIAE
NLLKNNLIFTQATIYDPIQIAMSPEDAKQWFGMVPPDLSLSARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNV
LEPLIGKVILVKDKNSHANSLLVVKRGEMFEGQFDSALKDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKA
YWKQLK

Sequences:

>Translated_246_residues
MMKIKVLLVAALAFLMSNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMRYNRMAQDLGLTTFDGQIAE
NLLKNNLIFTQATIYDPIQIAMSPEDAKQWFGMVPPDLSLSARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNV
LEPLIGKVILVKDKNSHANSLLVVKRGEMFEGQFDSALKDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKA
YWKQLK
>Mature_246_residues
MMKIKVLLVAALAFLMSNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYMRYNRMAQDLGLTTFDGQIAE
NLLKNNLIFTQATIYDPIQIAMSPEDAKQWFGMVPPDLSLSARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNV
LEPLIGKVILVKDKNSHANSLLVVKRGEMFEGQFDSALKDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKA
YWKQLK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 27972; Mature: 27972

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIKVLLVAALAFLMSNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYM
CCCHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RYNRMAQDLGLTTFDGQIAENLLKNNLIFTQATIYDPIQIAMSPEDAKQWFGMVPPDLSL
HHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCEEEEECCHHHHHHCCCCCCCCCC
SARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNVLEPLIGKVILVKDKNSHANS
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCE
LLVVKRGEMFEGQFDSALKDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKA
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWKQLK
HHHHCC
>Mature Secondary Structure
MMKIKVLLVAALAFLMSNAAFTENLTMDYVPVDINDKESLQRGAKMFMNYCSGCHSLKYM
CCCHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RYNRMAQDLGLTTFDGQIAENLLKNNLIFTQATIYDPIQIAMSPEDAKQWFGMVPPDLSL
HHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCEEEEECCHHHHHHCCCCCCCCCC
SARDRGPVWIYNYLKSFYSDPSRPFGANNLLMPDVAMPNVLEPLIGKVILVKDKNSHANS
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCE
LLVVKRGEMFEGQFDSALKDLVNFLVYVGEPAKLIRYKLGVFVLLFFCIFLIAAYSLKKA
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWKQLK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA