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The map label for this gene is sspA [H]

Identifier: 54295543

GI number: 54295543

Start: 3002008

End: 3002628

Strand: Reverse

Name: sspA [H]

Synonym: lpl2630

Alternate gene names: 54295543

Gene position: 3002628-3002008 (Counterclockwise)

Preceding gene: 54295544

Following gene: 54295542

Centisome position: 89.75

GC content: 37.2

Gene sequence:

>621_bases
ATGGCAATCGTTGCAAAGCGCACCATAATGTCTTTATTTTCTGATGTAGATGATGTTTATAGTCACCAAGTTCGTATCGT
TCTGGCAGAAAAAGGAGTTAATGTTGAAATTCTTGCAGTAAAGCAAGATGAGCCTGGAGCCGACCTATTGTCTATTAACC
CTTATGGAACCGTTCCTACATTAATTGATAGAGAACTTGTATTATATGAAGCAAGAATCATTATGGAATATTTGGATGAA
CGTTTCCCTCATCCTCCATTATTACCAGTTTATCCAGTAGCCCGTGCTGAAGCTCGCAAAATGATGCATAGAATTGAACA
GGATTGGTATTATTTAATGAACGCTATTTTGCGGGAGGAATCTGTAGAGCAAGCCAGAGCTAATTTACTTGAAAGTTTAA
CCAGTTTAGATCCTGTCTTTGCAGATAAACCTTATTTTTTAAGTGATGAATTTTCGCTTTTGGATTGTGCATTGGCTCCT
TTATTATGGCGGTTACCTAAATTAGGTTTGGAAATTGCGCCTAATTTTAAAGGAATAATTTCCTATATGCAGCGTGTGTT
TAAACGTGATTCTTTTCAAACGAGTTTGACGGACGCTGAGAGACAAATAAGAGCAGCATAA

Upstream 100 bases:

>100_bases
TAACCCAGAAGATTAAAAATGTGATAGAATAGCAACCTTTGTGTACTAGAATATAAAAAGCCATTTTAACAGGCTTAAAT
GAATTGATAGGAGTAAGGTA

Downstream 100 bases:

>100_bases
TTATGGCAATGACATCAAACAAACCCTACTTGATTCGTGCTTTCTACGATTGGATTGTTGATAATGATTTAACACCCTAC
ATTCTCGTAGATGCATCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MAIVAKRTIMSLFSDVDDVYSHQVRIVLAEKGVNVEILAVKQDEPGADLLSINPYGTVPTLIDRELVLYEARIIMEYLDE
RFPHPPLLPVYPVARAEARKMMHRIEQDWYYLMNAILREESVEQARANLLESLTSLDPVFADKPYFLSDEFSLLDCALAP
LLWRLPKLGLEIAPNFKGIISYMQRVFKRDSFQTSLTDAERQIRAA

Sequences:

>Translated_206_residues
MAIVAKRTIMSLFSDVDDVYSHQVRIVLAEKGVNVEILAVKQDEPGADLLSINPYGTVPTLIDRELVLYEARIIMEYLDE
RFPHPPLLPVYPVARAEARKMMHRIEQDWYYLMNAILREESVEQARANLLESLTSLDPVFADKPYFLSDEFSLLDCALAP
LLWRLPKLGLEIAPNFKGIISYMQRVFKRDSFQTSLTDAERQIRAA
>Mature_205_residues
AIVAKRTIMSLFSDVDDVYSHQVRIVLAEKGVNVEILAVKQDEPGADLLSINPYGTVPTLIDRELVLYEARIIMEYLDER
FPHPPLLPVYPVARAEARKMMHRIEQDWYYLMNAILREESVEQARANLLESLTSLDPVFADKPYFLSDEFSLLDCALAPL
LWRLPKLGLEIAPNFKGIISYMQRVFKRDSFQTSLTDAERQIRAA

Specific function: Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme [H]

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789624, Length=208, Percent_Identity=63.4615384615385, Blast_Score=268, Evalue=3e-73,
Organism=Caenorhabditis elegans, GI17551302, Length=166, Percent_Identity=30.1204819277108, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 23659; Mature: 23528

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVAKRTIMSLFSDVDDVYSHQVRIVLAEKGVNVEILAVKQDEPGADLLSINPYGTVPT
CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCCHH
LIDRELVLYEARIIMEYLDERFPHPPLLPVYPVARAEARKMMHRIEQDWYYLMNAILREE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVEQARANLLESLTSLDPVFADKPYFLSDEFSLLDCALAPLLWRLPKLGLEIAPNFKGII
HHHHHHHHHHHHHHHCCCHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEECCCHHHHH
SYMQRVFKRDSFQTSLTDAERQIRAA
HHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIVAKRTIMSLFSDVDDVYSHQVRIVLAEKGVNVEILAVKQDEPGADLLSINPYGTVPT
CCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCCHH
LIDRELVLYEARIIMEYLDERFPHPPLLPVYPVARAEARKMMHRIEQDWYYLMNAILREE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVEQARANLLESLTSLDPVFADKPYFLSDEFSLLDCALAPLLWRLPKLGLEIAPNFKGII
HHHHHHHHHHHHHHHCCCHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCEECCCHHHHH
SYMQRVFKRDSFQTSLTDAERQIRAA
HHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]