Click here to switch to the map view.

The map label for this gene is 54295357

Identifier: 54295357

GI number: 54295357

Start: 2783595

End: 2783963

Strand: Reverse

Name: 54295357

Synonym: lpl2442

Alternate gene names: NA

Gene position: 2783963-2783595 (Counterclockwise)

Preceding gene: 54295359

Following gene: 54295353

Centisome position: 83.21

GC content: 35.23

Gene sequence:

>369_bases
ATGCAAACCACCAAAGCTCACTACAGCAAGATATTCTTTGCCTTATTTCTTTTTTTTTCTACTGGTTCAAGCCCATTATT
TGCCTGCCCTTGTTTTAACATGGGCTTTTTACACGTAGCCTTTTTGGATGATAAAGATACGGAATGTCGCATATATAAAG
AAGGAAGTGTTGTTTATAAGATCGAGATTTTTGATAAGGAAAAAATTGCGTCAAGTACCCATACCCAATGTACGCTGAAT
ACTGAGCATCATGATGTTTTTATGAATTATGATTTTCATTACCTCGATGATCATGGGGATTGTATCAGAGAAATATTGGA
CGCATGTAACAAACTGAAAATAAACTCCTTGCATATGGATGATGAGTAA

Upstream 100 bases:

>100_bases
ATTAAAAACATTTTTTGCCTCGACTTTGGGGTTTATCGTAAGTCCTGATAGACTAATAATGGTCTACAATTAGACAAAAG
ACACTTAATCAGGGAAGAAT

Downstream 100 bases:

>100_bases
GATAAAGCAAGGTGAAATAGGACTGGCATTGAATGATTAGGACGCTCGCCCGGATTATAATTAAGATTAACCCGGGTTAG
GCTTATCAATTTTTAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MQTTKAHYSKIFFALFLFFSTGSSPLFACPCFNMGFLHVAFLDDKDTECRIYKEGSVVYKIEIFDKEKIASSTHTQCTLN
TEHHDVFMNYDFHYLDDHGDCIREILDACNKLKINSLHMDDE

Sequences:

>Translated_122_residues
MQTTKAHYSKIFFALFLFFSTGSSPLFACPCFNMGFLHVAFLDDKDTECRIYKEGSVVYKIEIFDKEKIASSTHTQCTLN
TEHHDVFMNYDFHYLDDHGDCIREILDACNKLKINSLHMDDE
>Mature_122_residues
MQTTKAHYSKIFFALFLFFSTGSSPLFACPCFNMGFLHVAFLDDKDTECRIYKEGSVVYKIEIFDKEKIASSTHTQCTLN
TEHHDVFMNYDFHYLDDHGDCIREILDACNKLKINSLHMDDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14206; Mature: 14206

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTTKAHYSKIFFALFLFFSTGSSPLFACPCFNMGFLHVAFLDDKDTECRIYKEGSVVYK
CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCEEEE
IEIFDKEKIASSTHTQCTLNTEHHDVFMNYDFHYLDDHGDCIREILDACNKLKINSLHMD
EEEECCHHHCCCCCCEEEECCCCCEEEEECCEEEECCCHHHHHHHHHHHCCEEEEEEECC
DE
CC
>Mature Secondary Structure
MQTTKAHYSKIFFALFLFFSTGSSPLFACPCFNMGFLHVAFLDDKDTECRIYKEGSVVYK
CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCEEEE
IEIFDKEKIASSTHTQCTLNTEHHDVFMNYDFHYLDDHGDCIREILDACNKLKINSLHMD
EEEECCHHHCCCCCCEEEECCCCCEEEEECCEEEECCCHHHHHHHHHHHCCEEEEEEECC
DE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA