Click here to switch to the map view.

The map label for this gene is algC [H]

Identifier: 54295321

GI number: 54295321

Start: 2736243

End: 2737631

Strand: Reverse

Name: algC [H]

Synonym: lpl2406

Alternate gene names: 54295321

Gene position: 2737631-2736243 (Counterclockwise)

Preceding gene: 54295322

Following gene: 54295318

Centisome position: 81.83

GC content: 41.61

Gene sequence:

>1389_bases
ATGACCTATCAACAAAAACAAATCCCCCGCTCTGTCTTTCGTGCCTATGACATTAGGGGGATTATCGGTAAAGAACTGGA
TGAGAATTCTTTTTATAGCATTGGCTTAGCTATTGCACGTTATTTACAAAAATTAAATCGTCGACAAATATTTTTAGCTC
GTGATGGACGTCTGACCAGTTATGCATTGGCTACGGCCTTGAAAGAGGGTTTGCTAGACAGCGGGATAGATATCCTTGAT
CTCGGCGCTGTGGCGACACCCGTCATGTATTATGCTACCCATACGCAAGGGATTGATTCTGGATTGATGGTTACCGGAAG
TCATAATCCTGCTGATTATAATGGTATCAAGTTAGTATTGGCTGGAAAAACATTAATTCAAGATGAAATAGATACACTTT
ACGATTTGCTGGGTGAAGTCAAACAGTCGGCTGTTCGTGGCACAGAAACGGCTTTTGATGTGATAGAAGGTTACATTCAG
CGTATCGTGAGCGATATTCAATTGAAGCGCCCTTTAAAAGTAGTTGTTGATTGTGGAAATGGTGTGGCGGGTCCAATTAT
TCCCAGGGCTATTGCGAAATTAGGTTGTGAAGTCATTCCCCTGTATTGTGAAGTGGATGGTCGATTTCCCAATCATCATC
CTGACCCTTCAATAGAAGCTAATTTAGTTGATTTAAAAGCGGCTGTGGCAAATCATCAAGCTGATATTGGTTTGGGCTTT
GATGGAGATGCTGACAGACTTGGTCTAGTGACAAATAAAGGCGAAGTGATTTGGCCTGATCGTTTAATGATGTTTTACTC
ACGAGAGATTTTAAGTCGTAATCCAGGTGCTACTGTTGTGTTTGATGTGAAGTGCTCCAGTCATTTGGAGAAAGAAATCC
AGGCAGCAGGCGGTGTTGCCAGAATGTGCCCCACTGGCCATTCAATTGTGAAAGCGGTGATGAAAAAAGAACAAGCCATC
CTGGCTGGCGAAATGAGCGGGCATCTGTTTTTTAAAGATCGCTGGTATGGATTTGACGATGCTTTATATAGCGCGTGCCG
ATTGTTAGAGATTATCAGCTCTTCCCATTTGACTGTCAGCGAACAATTTGAGTTGATCCCTAATAGTGTCAATACTCCTG
AAATAAAAATAGCGATTACTGATGAAGAAAAATTTGATTTTATTCAGCGTTTTAGTGAGCAGGCTGATTTCCCTGAGGGC
AGGATTTTGAATATTGATGGTTTGCGTGTTGAATTTCCAAATGGATGGGGATTGTTACGAGCATCAAACACAACTCCTTG
TCTGGTCGCACGTTTTGAGGCAACAGATAAAGATCATCTGGAGCAAATTCAATATTTGTTTAAGAAACAAATTCAGCGCC
TGGATTCTGAGTTGGATTTGCCATTTTAG

Upstream 100 bases:

>100_bases
AGTTTTTATCCCGGTTGTGCAGGCTTCTTTTGAGGTGGTCAATGAATTTACAGAAAGCTCCAGAGGAGAAGGTGGCTTTG
GCAGCTCCGGGAGATATTAA

Downstream 100 bases:

>100_bases
TGTTTAGGAATATGAAAAATTCAATATAGTGGTATCCTGCTCAGAATTTGTCAGATATGGACAGGACTAACGAAAAAGCC
TAGATAAAAGTTTATTTTTT

Product: phosphomannomutase

Products: NA

Alternate protein names: PMM / PGM [H]

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MTYQQKQIPRSVFRAYDIRGIIGKELDENSFYSIGLAIARYLQKLNRRQIFLARDGRLTSYALATALKEGLLDSGIDILD
LGAVATPVMYYATHTQGIDSGLMVTGSHNPADYNGIKLVLAGKTLIQDEIDTLYDLLGEVKQSAVRGTETAFDVIEGYIQ
RIVSDIQLKRPLKVVVDCGNGVAGPIIPRAIAKLGCEVIPLYCEVDGRFPNHHPDPSIEANLVDLKAAVANHQADIGLGF
DGDADRLGLVTNKGEVIWPDRLMMFYSREILSRNPGATVVFDVKCSSHLEKEIQAAGGVARMCPTGHSIVKAVMKKEQAI
LAGEMSGHLFFKDRWYGFDDALYSACRLLEIISSSHLTVSEQFELIPNSVNTPEIKIAITDEEKFDFIQRFSEQADFPEG
RILNIDGLRVEFPNGWGLLRASNTTPCLVARFEATDKDHLEQIQYLFKKQIQRLDSELDLPF

Sequences:

>Translated_462_residues
MTYQQKQIPRSVFRAYDIRGIIGKELDENSFYSIGLAIARYLQKLNRRQIFLARDGRLTSYALATALKEGLLDSGIDILD
LGAVATPVMYYATHTQGIDSGLMVTGSHNPADYNGIKLVLAGKTLIQDEIDTLYDLLGEVKQSAVRGTETAFDVIEGYIQ
RIVSDIQLKRPLKVVVDCGNGVAGPIIPRAIAKLGCEVIPLYCEVDGRFPNHHPDPSIEANLVDLKAAVANHQADIGLGF
DGDADRLGLVTNKGEVIWPDRLMMFYSREILSRNPGATVVFDVKCSSHLEKEIQAAGGVARMCPTGHSIVKAVMKKEQAI
LAGEMSGHLFFKDRWYGFDDALYSACRLLEIISSSHLTVSEQFELIPNSVNTPEIKIAITDEEKFDFIQRFSEQADFPEG
RILNIDGLRVEFPNGWGLLRASNTTPCLVARFEATDKDHLEQIQYLFKKQIQRLDSELDLPF
>Mature_461_residues
TYQQKQIPRSVFRAYDIRGIIGKELDENSFYSIGLAIARYLQKLNRRQIFLARDGRLTSYALATALKEGLLDSGIDILDL
GAVATPVMYYATHTQGIDSGLMVTGSHNPADYNGIKLVLAGKTLIQDEIDTLYDLLGEVKQSAVRGTETAFDVIEGYIQR
IVSDIQLKRPLKVVVDCGNGVAGPIIPRAIAKLGCEVIPLYCEVDGRFPNHHPDPSIEANLVDLKAAVANHQADIGLGFD
GDADRLGLVTNKGEVIWPDRLMMFYSREILSRNPGATVVFDVKCSSHLEKEIQAAGGVARMCPTGHSIVKAVMKKEQAIL
AGEMSGHLFFKDRWYGFDDALYSACRLLEIISSSHLTVSEQFELIPNSVNTPEIKIAITDEEKFDFIQRFSEQADFPEGR
ILNIDGLRVEFPNGWGLLRASNTTPCLVARFEATDKDHLEQIQYLFKKQIQRLDSELDLPF

Specific function: The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to it

COG id: COG1109

COG function: function code G; Phosphomannomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphohexose mutase family [H]

Homologues:

Organism=Escherichia coli, GI1788361, Length=444, Percent_Identity=35.1351351351351, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI1789566, Length=457, Percent_Identity=24.0700218818381, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005844
- InterPro:   IPR016055
- InterPro:   IPR005845
- InterPro:   IPR005846
- InterPro:   IPR005843
- InterPro:   IPR016066
- InterPro:   IPR005841 [H]

Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]

EC number: =5.4.2.2; =5.4.2.8 [H]

Molecular weight: Translated: 51370; Mature: 51239

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00710 PGM_PMM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYQQKQIPRSVFRAYDIRGIIGKELDENSFYSIGLAIARYLQKLNRRQIFLARDGRLTS
CCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
YALATALKEGLLDSGIDILDLGAVATPVMYYATHTQGIDSGLMVTGSHNPADYNGIKLVL
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCCCEEEEE
AGKTLIQDEIDTLYDLLGEVKQSAVRGTETAFDVIEGYIQRIVSDIQLKRPLKVVVDCGN
ECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
GVAGPIIPRAIAKLGCEVIPLYCEVDGRFPNHHPDPSIEANLVDLKAAVANHQADIGLGF
CCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCC
DGDADRLGLVTNKGEVIWPDRLMMFYSREILSRNPGATVVFDVKCSSHLEKEIQAAGGVA
CCCCCCEEEEECCCCEECHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCH
RMCPTGHSIVKAVMKKEQAILAGEMSGHLFFKDRWYGFDDALYSACRLLEIISSSHLTVS
HHCCCCHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEH
EQFELIPNSVNTPEIKIAITDEEKFDFIQRFSEQADFPEGRILNIDGLRVEFPNGWGLLR
HHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCEEEE
ASNTTPCLVARFEATDKDHLEQIQYLFKKQIQRLDSELDLPF
ECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TYQQKQIPRSVFRAYDIRGIIGKELDENSFYSIGLAIARYLQKLNRRQIFLARDGRLTS
CCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
YALATALKEGLLDSGIDILDLGAVATPVMYYATHTQGIDSGLMVTGSHNPADYNGIKLVL
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCCCEEEEE
AGKTLIQDEIDTLYDLLGEVKQSAVRGTETAFDVIEGYIQRIVSDIQLKRPLKVVVDCGN
ECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
GVAGPIIPRAIAKLGCEVIPLYCEVDGRFPNHHPDPSIEANLVDLKAAVANHQADIGLGF
CCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCC
DGDADRLGLVTNKGEVIWPDRLMMFYSREILSRNPGATVVFDVKCSSHLEKEIQAAGGVA
CCCCCCEEEEECCCCEECHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCH
RMCPTGHSIVKAVMKKEQAILAGEMSGHLFFKDRWYGFDDALYSACRLLEIISSSHLTVS
HHCCCCHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEH
EQFELIPNSVNTPEIKIAITDEEKFDFIQRFSEQADFPEGRILNIDGLRVEFPNGWGLLR
HHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCEEEE
ASNTTPCLVARFEATDKDHLEQIQYLFKKQIQRLDSELDLPF
ECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]