Click here to switch to the map view.

The map label for this gene is ynjA [H]

Identifier: 54295318

GI number: 54295318

Start: 2733107

End: 2733664

Strand: Reverse

Name: ynjA [H]

Synonym: lpl2403

Alternate gene names: 54295318

Gene position: 2733664-2733107 (Counterclockwise)

Preceding gene: 54295321

Following gene: 54295316

Centisome position: 81.71

GC content: 37.46

Gene sequence:

>558_bases
ATGAGAATTTTGGAAAAAAATATCAAGAAGACTCCCTGGTATTTAAAACCATTCTTCTGGAATCAAAAAAGAAAATACGG
CCAAATACTCGAACCTGCTTTGATTTGGGCAAGAATTCCCAGGTTATTTTTGGCAGTTGCTGCTATGTATGGCGTGATAG
ACAGAAAAAAATCACCACTTTCCCCAATATTACGCTCTCTCATAACTGTCAGGGTTTCTCAAATTAACTGGTGTGCGTTT
TGTGTTGATATTAATTCAGCAACTTTAATTAAAAGGGCTGGAAGTGAAGCACAGTATAAACAACTGGCGAAATGGAGGAG
TTCCTCATTATTTTCACCAGAAGAAAAAGCGGCATTGGATTATGCTGAAAAAGTAACTTATTCTGATCAGCGTCCTGATG
ATGAGTGCTTCAATCAATTGAAATTGTATTATTCTGAACAGGAAATCATTGAATTGACAGCACTCATTGCATTTCAGAAT
ATGTCCAGTAAATTTAATAGTGCCCTTGGCGTTGAAGCACAAGGATTTTGTTCGAGGCAACTGACTGGCAAAAGCTGA

Upstream 100 bases:

>100_bases
CTAATTCTTTTATTTTTCCAGGGTTACTGGTTGCCAAAATAATTTCTTTCATTCTTATTCCATGCTATTAATTCAGTATT
CATAAAAAGGATAATTATGC

Downstream 100 bases:

>100_bases
ATCGTCCTGCCAGTCAGTACTTTCAATTACATAGAGATGCTTTTACCTATTGTATTGTCGTTGACTCGATCATGCCTTAG
TTGTTGTTCATCTGTAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRILEKNIKKTPWYLKPFFWNQKRKYGQILEPALIWARIPRLFLAVAAMYGVIDRKKSPLSPILRSLITVRVSQINWCAF
CVDINSATLIKRAGSEAQYKQLAKWRSSSLFSPEEKAALDYAEKVTYSDQRPDDECFNQLKLYYSEQEIIELTALIAFQN
MSSKFNSALGVEAQGFCSRQLTGKS

Sequences:

>Translated_185_residues
MRILEKNIKKTPWYLKPFFWNQKRKYGQILEPALIWARIPRLFLAVAAMYGVIDRKKSPLSPILRSLITVRVSQINWCAF
CVDINSATLIKRAGSEAQYKQLAKWRSSSLFSPEEKAALDYAEKVTYSDQRPDDECFNQLKLYYSEQEIIELTALIAFQN
MSSKFNSALGVEAQGFCSRQLTGKS
>Mature_185_residues
MRILEKNIKKTPWYLKPFFWNQKRKYGQILEPALIWARIPRLFLAVAAMYGVIDRKKSPLSPILRSLITVRVSQINWCAF
CVDINSATLIKRAGSEAQYKQLAKWRSSSLFSPEEKAALDYAEKVTYSDQRPDDECFNQLKLYYSEQEIIELTALIAFQN
MSSKFNSALGVEAQGFCSRQLTGKS

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2313c [H]

Homologues:

Organism=Escherichia coli, GI1788050, Length=170, Percent_Identity=42.9411764705882, Blast_Score=159, Evalue=8e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 21316; Mature: 21316

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILEKNIKKTPWYLKPFFWNQKRKYGQILEPALIWARIPRLFLAVAAMYGVIDRKKSPL
CCCCHHHCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SPILRSLITVRVSQINWCAFCVDINSATLIKRAGSEAQYKQLAKWRSSSLFSPEEKAALD
HHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHH
YAEKVTYSDQRPDDECFNQLKLYYSEQEIIELTALIAFQNMSSKFNSALGVEAQGFCSRQ
HHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
LTGKS
CCCCC
>Mature Secondary Structure
MRILEKNIKKTPWYLKPFFWNQKRKYGQILEPALIWARIPRLFLAVAAMYGVIDRKKSPL
CCCCHHHCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SPILRSLITVRVSQINWCAFCVDINSATLIKRAGSEAQYKQLAKWRSSSLFSPEEKAALD
HHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHH
YAEKVTYSDQRPDDECFNQLKLYYSEQEIIELTALIAFQNMSSKFNSALGVEAQGFCSRQ
HHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
LTGKS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]