Definition | Legionella pneumophila str. Lens, complete genome. |
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Accession | NC_006369 |
Length | 3,345,687 |
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The map label for this gene is ydjC [C]
Identifier: 54295315
GI number: 54295315
Start: 2729584
End: 2730396
Strand: Reverse
Name: ydjC [C]
Synonym: lpl2400
Alternate gene names: 54295315
Gene position: 2730396-2729584 (Counterclockwise)
Preceding gene: 54295316
Following gene: 54295312
Centisome position: 81.61
GC content: 35.79
Gene sequence:
>813_bases ATGAGTGATCTGAAAAATATATTCTTGTGCGCTGATGATTTTGGCCTTAATCATGGTATTACCCAGGGTATTTTAAAAAT GGCTCGTTTACAGCGCTTATCCGCAGTAAGCTGTATTGTGAATGCCAGTTTTTTTGATGTCGATGCCCCAGACTTATTGG CTTTGAAAAATGGGGTTCGCACTGGCTTGCATTTTAATCTCACAGAAGGTTATTTTCTATCTCATCCTGACAAGCTTTGT TTTGGTTTAAGAGAATTACTTATCAGATCGCATTTGGGTATCTTGAATTCAAGATTAATCTCAGATGAATTGAATACTCA ATTGGATCATTTCATAAAAGTCATGGGAAAGTTGCCGGATTTTATTGATGGTCATCAACATATCCATCAGTTTCCTGGTA TTAGGCGAATTATTATTGATATGTATGAACAGCGATTAAAGGGAAAGAGTATTTTTATTCGTTCCACTTACCCTTCGGTT AACATGTCAGGGTATCAAGCAAAAACAAAAATTCTGGGAATAACAGGCGGTAAAATTTTAAGTAGCCAGTTAAAGAAAAC AAATATTCCTCATAATCCTTATTTTGCAGGGATTTACGATTTTTCTGACAGAACAAACTACAGATCTTTATTCAGGCAAT GGTTAAACAATGTTCCGACAAATACGTTAATCATGTGCCATCCTGGTGAATGTGAGAATAGTGATATTATTGCAGCGGCA AGAGCCAGGGAACTAAATTATTTTTTGAGTGATGAATTTATGCAAGATTGTGAGGAATACCAAGTCAATTTAACGACAGG CCCAAAATCTTGA
Upstream 100 bases:
>100_bases CCCCCATAACATAGATTATCAGATAATTATTTTGGTTATTACAAAATAAGGATAGGGGCAGTAATATATTACAATTTTTT TTGGAATTAGAAGTTATTTA
Downstream 100 bases:
>100_bases AAAAAGATAGTTGTAAACTGCAACGATACTTAAAACAAAAACCAGGGCAGTAATATAATGTAACGTTGTGAAGCGTAATA GCAGATAATATAGTGTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: YdjC-Like Protein; Cellobiose Phosphorylase; Exported Protein
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSDLKNIFLCADDFGLNHGITQGILKMARLQRLSAVSCIVNASFFDVDAPDLLALKNGVRTGLHFNLTEGYFLSHPDKLC FGLRELLIRSHLGILNSRLISDELNTQLDHFIKVMGKLPDFIDGHQHIHQFPGIRRIIIDMYEQRLKGKSIFIRSTYPSV NMSGYQAKTKILGITGGKILSSQLKKTNIPHNPYFAGIYDFSDRTNYRSLFRQWLNNVPTNTLIMCHPGECENSDIIAAA RARELNYFLSDEFMQDCEEYQVNLTTGPKS
Sequences:
>Translated_270_residues MSDLKNIFLCADDFGLNHGITQGILKMARLQRLSAVSCIVNASFFDVDAPDLLALKNGVRTGLHFNLTEGYFLSHPDKLC FGLRELLIRSHLGILNSRLISDELNTQLDHFIKVMGKLPDFIDGHQHIHQFPGIRRIIIDMYEQRLKGKSIFIRSTYPSV NMSGYQAKTKILGITGGKILSSQLKKTNIPHNPYFAGIYDFSDRTNYRSLFRQWLNNVPTNTLIMCHPGECENSDIIAAA RARELNYFLSDEFMQDCEEYQVNLTTGPKS >Mature_269_residues SDLKNIFLCADDFGLNHGITQGILKMARLQRLSAVSCIVNASFFDVDAPDLLALKNGVRTGLHFNLTEGYFLSHPDKLCF GLRELLIRSHLGILNSRLISDELNTQLDHFIKVMGKLPDFIDGHQHIHQFPGIRRIIIDMYEQRLKGKSIFIRSTYPSVN MSGYQAKTKILGITGGKILSSQLKKTNIPHNPYFAGIYDFSDRTNYRSLFRQWLNNVPTNTLIMCHPGECENSDIIAAAR ARELNYFLSDEFMQDCEEYQVNLTTGPKS
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30678; Mature: 30547
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLKNIFLCADDFGLNHGITQGILKMARLQRLSAVSCIVNASFFDVDAPDLLALKNGVR CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCC TGLHFNLTEGYFLSHPDKLCFGLRELLIRSHLGILNSRLISDELNTQLDHFIKVMGKLPD CCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FIDGHQHIHQFPGIRRIIIDMYEQRLKGKSIFIRSTYPSVNMSGYQAKTKILGITGGKIL HHCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHH SSQLKKTNIPHNPYFAGIYDFSDRTNYRSLFRQWLNNVPTNTLIMCHPGECENSDIIAAA HHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEHH RARELNYFLSDEFMQDCEEYQVNLTTGPKS HHHHHHHHHHHHHHHHHHHHEEEEECCCCC >Mature Secondary Structure SDLKNIFLCADDFGLNHGITQGILKMARLQRLSAVSCIVNASFFDVDAPDLLALKNGVR CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCC TGLHFNLTEGYFLSHPDKLCFGLRELLIRSHLGILNSRLISDELNTQLDHFIKVMGKLPD CCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FIDGHQHIHQFPGIRRIIIDMYEQRLKGKSIFIRSTYPSVNMSGYQAKTKILGITGGKIL HHCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHH SSQLKKTNIPHNPYFAGIYDFSDRTNYRSLFRQWLNNVPTNTLIMCHPGECENSDIIAAA HHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEHH RARELNYFLSDEFMQDCEEYQVNLTTGPKS HHHHHHHHHHHHHHHHHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA