Definition | Legionella pneumophila str. Lens, complete genome. |
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Accession | NC_006369 |
Length | 3,345,687 |
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The map label for this gene is pgsA [H]
Identifier: 54295132
GI number: 54295132
Start: 2526541
End: 2527104
Strand: Reverse
Name: pgsA [H]
Synonym: lpl2212
Alternate gene names: 54295132
Gene position: 2527104-2526541 (Counterclockwise)
Preceding gene: 54295133
Following gene: 54295131
Centisome position: 75.53
GC content: 40.07
Gene sequence:
>564_bases GTGAGTACGTTAACCAGTTTGCCTAATATATTAACCTTAATGCGGATTTCGATCATTCCAGTATTTATTATGGTATTTTA TTTTCCTTTCAAATGGGCTCATCCTACCGCTGCTGTTCTTTTTGCTATTGCAAGCATTACTGATTGGCTAGACGGTTATT TGGCGCGCAAACTTGAAATGATGTCTCATTTTGGAGCTTTTCTTGATCCCGTCGCCGATAAATTATTGGTATCGACAAGC TTGTTATTGTTAGTTGGAGCGAAGGATATAGATTATATCACTATACCTGCAATCGTAATCGTTGGACGAGAAATTGTGAT TTCAGCCTTGCGCGAGTGGATGGCTGAAGTTGGAAGTCGTGCTAGTGTTGCCGTTGGGTATATAGGGAAAGTTAAAACTT CTTTGCAAATGATCGCTTTGGTATTATTGCTGGCATTTAATCCCCTTGTCTCCTGGTGGGGGAGCTTAGGGTTTGCTCTT CTTTATGTGTCTGCTATTTTGACGATTTGGTCCATGGTGATTTATTTGGCTATTGCCTGGCCAGAGTTAATGAAAAAAAG TTAA
Upstream 100 bases:
>100_bases CGCTTAAGGCAGCAGGTGCTTTGGCTGTGTTTGATGATTATAAGCTATTGTCAGCTTATCTGATGTTGCCGGAAGCATAA AAAAAGGGGGATGTTCAGCA
Downstream 100 bases:
>100_bases TTTTGCTGTTGACAGGGTATTTATTTTCGGTAGAATCTCATCCCGTAGAGACGCGGGAATAGCTCAGTTGGTAGAGCATA ACCTTGCCAAGGTTAGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSTLTSLPNILTLMRISIIPVFIMVFYFPFKWAHPTAAVLFAIASITDWLDGYLARKLEMMSHFGAFLDPVADKLLVSTS LLLLVGAKDIDYITIPAIVIVGREIVISALREWMAEVGSRASVAVGYIGKVKTSLQMIALVLLLAFNPLVSWWGSLGFAL LYVSAILTIWSMVIYLAIAWPELMKKS
Sequences:
>Translated_187_residues MSTLTSLPNILTLMRISIIPVFIMVFYFPFKWAHPTAAVLFAIASITDWLDGYLARKLEMMSHFGAFLDPVADKLLVSTS LLLLVGAKDIDYITIPAIVIVGREIVISALREWMAEVGSRASVAVGYIGKVKTSLQMIALVLLLAFNPLVSWWGSLGFAL LYVSAILTIWSMVIYLAIAWPELMKKS >Mature_186_residues STLTSLPNILTLMRISIIPVFIMVFYFPFKWAHPTAAVLFAIASITDWLDGYLARKLEMMSHFGAFLDPVADKLLVSTSL LLLVGAKDIDYITIPAIVIVGREIVISALREWMAEVGSRASVAVGYIGKVKTSLQMIALVLLLAFNPLVSWWGSLGFALL YVSAILTIWSMVIYLAIAWPELMKKS
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=181, Percent_Identity=49.171270718232, Blast_Score=179, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320059, Length=112, Percent_Identity=43.75, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20711; Mature: 20580
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLTSLPNILTLMRISIIPVFIMVFYFPFKWAHPTAAVLFAIASITDWLDGYLARKLEM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MSHFGAFLDPVADKLLVSTSLLLLVGAKDIDYITIPAIVIVGREIVISALREWMAEVGSR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASVAVGYIGKVKTSLQMIALVLLLAFNPLVSWWGSLGFALLYVSAILTIWSMVIYLAIAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PELMKKS HHHHCCC >Mature Secondary Structure STLTSLPNILTLMRISIIPVFIMVFYFPFKWAHPTAAVLFAIASITDWLDGYLARKLEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MSHFGAFLDPVADKLLVSTSLLLLVGAKDIDYITIPAIVIVGREIVISALREWMAEVGSR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASVAVGYIGKVKTSLQMIALVLLLAFNPLVSWWGSLGFALLYVSAILTIWSMVIYLAIAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PELMKKS HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA