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The map label for this gene is 54295018

Identifier: 54295018

GI number: 54295018

Start: 2378077

End: 2378541

Strand: Reverse

Name: 54295018

Synonym: lpl2098

Alternate gene names: NA

Gene position: 2378541-2378077 (Counterclockwise)

Preceding gene: 54295022

Following gene: 54295015

Centisome position: 71.09

GC content: 30.97

Gene sequence:

>465_bases
GTGTTAAAGGGAGATAATCAGTATTTTTTAGACATTGGATATTATTCCGGTAAGGGCAGTTTAACCATTTTATTTACGTC
TAAAATAAAAAATTTTGATGAAAAAAATCGTTCGTTTGTTTTAGTGTCGACCACCGAAATTCCTATGATAGCACTCAATA
GCATGCTATTTAGTTTGATTAATTCCATTAAAAATAATAAAAAAGGAGTGCAAAGTTACCAAATCAGAAACGACATTTAT
CCGATCAAACTAACAAATAAGCAGTCAGAATGTTTGTTTTATCTCTTGAGAGGGAATAGTATGAAAGAGATTGCTTTTAT
TTTGAATCGTTCAACACGAACGATAGAAGATCATATTAACCTGCTTAAATGTAAGTTTAATTGTGTGACTAAATCACAGC
TAATTGATAAAGCGTTTCAACTTGGTTTTGGGCAAATTATTCCTCCTGCGCTATTAGCTTTTTAA

Upstream 100 bases:

>100_bases
AAACTATGAAACAGGAAAGTACCAAAAAATACATTTTTTTCATTCTTTACCTCGCTTGGTCATTAATAATGAATACTAAA
TTGGCCAGCAAGATTATTCA

Downstream 100 bases:

>100_bases
TGAGGATGTTTCCATTGCCCTTCGGCAATACCCTTATAGATCACATAAGTAGAGAGAATTAAAAGGATATGATAGATATC
ATTATCATAGCAATATTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLKGDNQYFLDIGYYSGKGSLTILFTSKIKNFDEKNRSFVLVSTTEIPMIALNSMLFSLINSIKNNKKGVQSYQIRNDIY
PIKLTNKQSECLFYLLRGNSMKEIAFILNRSTRTIEDHINLLKCKFNCVTKSQLIDKAFQLGFGQIIPPALLAF

Sequences:

>Translated_154_residues
MLKGDNQYFLDIGYYSGKGSLTILFTSKIKNFDEKNRSFVLVSTTEIPMIALNSMLFSLINSIKNNKKGVQSYQIRNDIY
PIKLTNKQSECLFYLLRGNSMKEIAFILNRSTRTIEDHINLLKCKFNCVTKSQLIDKAFQLGFGQIIPPALLAF
>Mature_154_residues
MLKGDNQYFLDIGYYSGKGSLTILFTSKIKNFDEKNRSFVLVSTTEIPMIALNSMLFSLINSIKNNKKGVQSYQIRNDIY
PIKLTNKQSECLFYLLRGNSMKEIAFILNRSTRTIEDHINLLKCKFNCVTKSQLIDKAFQLGFGQIIPPALLAF

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17619; Mature: 17619

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGDNQYFLDIGYYSGKGSLTILFTSKIKNFDEKNRSFVLVSTTEIPMIALNSMLFSLI
CCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH
NSIKNNKKGVQSYQIRNDIYPIKLTNKQSECLFYLLRGNSMKEIAFILNRSTRTIEDHIN
HHHCCCCCCCHHEECCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHE
LLKCKFNCVTKSQLIDKAFQLGFGQIIPPALLAF
EEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure
MLKGDNQYFLDIGYYSGKGSLTILFTSKIKNFDEKNRSFVLVSTTEIPMIALNSMLFSLI
CCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH
NSIKNNKKGVQSYQIRNDIYPIKLTNKQSECLFYLLRGNSMKEIAFILNRSTRTIEDHIN
HHHCCCCCCCHHEECCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHE
LLKCKFNCVTKSQLIDKAFQLGFGQIIPPALLAF
EEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA