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The map label for this gene is 54294892

Identifier: 54294892

GI number: 54294892

Start: 2213259

End: 2213816

Strand: Reverse

Name: 54294892

Synonym: lpl1971

Alternate gene names: NA

Gene position: 2213816-2213259 (Counterclockwise)

Preceding gene: 54294893

Following gene: 54294891

Centisome position: 66.17

GC content: 36.2

Gene sequence:

>558_bases
ATGAAAAAAACTGATTCCGGTTTCATTCTTTTAATGACGCTCTGTATAACTTTCTTGATGAGCTTATTGGTTTTGGCAAG
CCTCCAACTGATATTCTTGCAATACAAAGCACTCAATTCACAGGAGACATTTCATCAAAATTTCTATCAGTTGGAACATT
GGATGATGCGACTGGCGCGTTCACCGTTATTGTATGCAGGTATGGATTGTTATGTGCAAAAAGATTATGGAGCTAATAAA
ATAGCAAACGAGTTGGTTAACAATAAAGGATGTTTGCTCATATTAAATCAGAAAAAATACAGATATTTTATTGAGGACCT
TAACGAGTTTTCTTGCTTGGTTCTTAATAAAGATGGGCAGAAATATGCTTCTCACCATTTTAGATTCACCGTATTACAAG
ACGAGGAGCATGGCGAATCTGCCATCATGCAATTAAGGTTTATCAAATTGGGTAGCAATTTGTCCTCTTGTCCAGAAGAG
GAAATACAGGTGAAGGAAGGGGTAAGCAGCTGGAGATACTTGCCAGATTATAAAAATTTTGAAATATTAACTGGTTGA

Upstream 100 bases:

>100_bases
ATGTTACCAGACGTCTTATCAAACAGAGGTCAGTATTGGATTTTTCAATTGGTAGCGATAAGGAAACGCTGCGTAAAATC
AGTGTTTCGGTACGAAATTT

Downstream 100 bases:

>100_bases
AATTATTGAAAAAAAACTATTATAACCGGATGTTTTTTGTAGTAAGATGGACTAATAACAATAATTTTTAGTTGCATTTT
TCCCCATCACGTGTAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKKTDSGFILLMTLCITFLMSLLVLASLQLIFLQYKALNSQETFHQNFYQLEHWMMRLARSPLLYAGMDCYVQKDYGANK
IANELVNNKGCLLILNQKKYRYFIEDLNEFSCLVLNKDGQKYASHHFRFTVLQDEEHGESAIMQLRFIKLGSNLSSCPEE
EIQVKEGVSSWRYLPDYKNFEILTG

Sequences:

>Translated_185_residues
MKKTDSGFILLMTLCITFLMSLLVLASLQLIFLQYKALNSQETFHQNFYQLEHWMMRLARSPLLYAGMDCYVQKDYGANK
IANELVNNKGCLLILNQKKYRYFIEDLNEFSCLVLNKDGQKYASHHFRFTVLQDEEHGESAIMQLRFIKLGSNLSSCPEE
EIQVKEGVSSWRYLPDYKNFEILTG
>Mature_185_residues
MKKTDSGFILLMTLCITFLMSLLVLASLQLIFLQYKALNSQETFHQNFYQLEHWMMRLARSPLLYAGMDCYVQKDYGANK
IANELVNNKGCLLILNQKKYRYFIEDLNEFSCLVLNKDGQKYASHHFRFTVLQDEEHGESAIMQLRFIKLGSNLSSCPEE
EIQVKEGVSSWRYLPDYKNFEILTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21619; Mature: 21619

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTDSGFILLMTLCITFLMSLLVLASLQLIFLQYKALNSQETFHQNFYQLEHWMMRLAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
SPLLYAGMDCYVQKDYGANKIANELVNNKGCLLILNQKKYRYFIEDLNEFSCLVLNKDGQ
CCCEEECCEEEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCEEEEECCCCH
KYASHHFRFTVLQDEEHGESAIMQLRFIKLGSNLSSCPEEEIQVKEGVSSWRYLPDYKNF
HHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCE
EILTG
EEECC
>Mature Secondary Structure
MKKTDSGFILLMTLCITFLMSLLVLASLQLIFLQYKALNSQETFHQNFYQLEHWMMRLAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
SPLLYAGMDCYVQKDYGANKIANELVNNKGCLLILNQKKYRYFIEDLNEFSCLVLNKDGQ
CCCEEECCEEEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCEEEEECCCCH
KYASHHFRFTVLQDEEHGESAIMQLRFIKLGSNLSSCPEEEIQVKEGVSSWRYLPDYKNF
HHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCE
EILTG
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA