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The map label for this gene is lspK [H]

Identifier: 54294244

GI number: 54294244

Start: 1466468

End: 1467436

Strand: Reverse

Name: lspK [H]

Synonym: lpl1309

Alternate gene names: 54294244

Gene position: 1467436-1466468 (Counterclockwise)

Preceding gene: 54294245

Following gene: 54294243

Centisome position: 43.86

GC content: 37.46

Gene sequence:

>969_bases
ATGTTTATGAGTAGCCCACCTTCAAAATCCATTGCCAGTTCTAAAATGCAAGGAAGCGCTCTTTTAACGGCTCTATTTAT
TATGACATTGGTTGCTATAGTTGCCACTGCCATGAGCACACGATTACAACAGGACATTTACAGAACAAGACTAGTAATTG
CTCAGGATAAACTATATCTTGCTTCTCAGGCAGTTACTTTCTGGGCGCTCAATGAGTTACTTGATAAGAACAACCGCTTT
ACAAAAACCAACCAGTTAGGGATGGTAGCCCAATACCCTAAAAATATGGAATCCATATATAATCAAGTTCAATTAAGTGG
TGGAATTTTTGATTTACAAGCACGATTTAACCTCAATAACCTGATTGAGAAAAAATCCATTCCCACTTTAATGCACCTGA
TAAGCCACACCTACTCAAAGGCAACCGGCCAAGAACGTGCTAATATAGCCTTGGGAGTAAAGCATTGGTTGCTTGCTTAT
GATCTTGGCCGAGGAGAAGATATTTATACCTCTTATTATCTCGCTCAGAAACCTCCTTACTATCCCAGCCATCAACTTAT
AAAAAGTAAATCTGAATTTCGATTGATAAAAGATGTAAGTGCACCCGCTTATATTGCCCTTGAACCTTTTATCACAGCCC
TGCCTGAATCAACGAGCATTAACATTAATACTGCCCCAAAACAAATATTGATGTCATTAGGAGATGGATTAAGTGACGCC
CAGGCAAATGAATTAATAACTGCTCGGGGAGAAGATGGTATCACTGATCTGAAAGAGATCAACGAGTTATTAAAAAAATT
CAATATTCCCAGCGACCAAATAACCATTGAAAGTCAATATTATCTCAGCATTGCCTATGCAAAGAATGATGAATTTAGTT
TAGTTGTGTATTCTTTATTAAAACGTAGTCGTGACAGGAAGGGTAAGTTATTAACAAGCGTCATTAGAGAGAGTATTAAT
AATTTTTGA

Upstream 100 bases:

>100_bases
AATCAGCAAAGAGAACCTCTTCCCAAAGCAATCCAAATGAATCTCACTTTAAAGGACTGGGGAGATATGAACATGCTTTT
TATCATACCCGGAGCACTCT

Downstream 100 bases:

>100_bases
CTTAAGCTCAAATGTTCCAAACAATATGAATACGCCAGAATCCAACTTTTAGTTAATGGGTTGCCATCCGATTTTTATTT
TTACCAGGAATGAGTGCTTT

Product: type II secretory pathway protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MFMSSPPSKSIASSKMQGSALLTALFIMTLVAIVATAMSTRLQQDIYRTRLVIAQDKLYLASQAVTFWALNELLDKNNRF
TKTNQLGMVAQYPKNMESIYNQVQLSGGIFDLQARFNLNNLIEKKSIPTLMHLISHTYSKATGQERANIALGVKHWLLAY
DLGRGEDIYTSYYLAQKPPYYPSHQLIKSKSEFRLIKDVSAPAYIALEPFITALPESTSININTAPKQILMSLGDGLSDA
QANELITARGEDGITDLKEINELLKKFNIPSDQITIESQYYLSIAYAKNDEFSLVVYSLLKRSRDRKGKLLTSVIRESIN
NF

Sequences:

>Translated_322_residues
MFMSSPPSKSIASSKMQGSALLTALFIMTLVAIVATAMSTRLQQDIYRTRLVIAQDKLYLASQAVTFWALNELLDKNNRF
TKTNQLGMVAQYPKNMESIYNQVQLSGGIFDLQARFNLNNLIEKKSIPTLMHLISHTYSKATGQERANIALGVKHWLLAY
DLGRGEDIYTSYYLAQKPPYYPSHQLIKSKSEFRLIKDVSAPAYIALEPFITALPESTSININTAPKQILMSLGDGLSDA
QANELITARGEDGITDLKEINELLKKFNIPSDQITIESQYYLSIAYAKNDEFSLVVYSLLKRSRDRKGKLLTSVIRESIN
NF
>Mature_322_residues
MFMSSPPSKSIASSKMQGSALLTALFIMTLVAIVATAMSTRLQQDIYRTRLVIAQDKLYLASQAVTFWALNELLDKNNRF
TKTNQLGMVAQYPKNMESIYNQVQLSGGIFDLQARFNLNNLIEKKSIPTLMHLISHTYSKATGQERANIALGVKHWLLAY
DLGRGEDIYTSYYLAQKPPYYPSHQLIKSKSEFRLIKDVSAPAYIALEPFITALPESTSININTAPKQILMSLGDGLSDA
QANELITARGEDGITDLKEINELLKKFNIPSDQITIESQYYLSIAYAKNDEFSLVVYSLLKRSRDRKGKLLTSVIRESIN
NF

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3156

COG function: function code U; Type II secretory pathway, component PulK

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP K family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005628 [H]

Pfam domain/function: PF03934 GspK [H]

EC number: NA

Molecular weight: Translated: 36212; Mature: 36212

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMSSPPSKSIASSKMQGSALLTALFIMTLVAIVATAMSTRLQQDIYRTRLVIAQDKLYL
CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHH
ASQAVTFWALNELLDKNNRFTKTNQLGMVAQYPKNMESIYNQVQLSGGIFDLQARFNLNN
HHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHHH
LIEKKSIPTLMHLISHTYSKATGQERANIALGVKHWLLAYDLGRGEDIYTSYYLAQKPPY
HHHHHCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCHHHEEEECCCCCC
YPSHQLIKSKSEFRLIKDVSAPAYIALEPFITALPESTSININTAPKQILMSLGDGLSDA
CCCHHHHHCHHHHHHHHHCCCCEEEEECHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCC
QANELITARGEDGITDLKEINELLKKFNIPSDQITIESQYYLSIAYAKNDEFSLVVYSLL
CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEEECCCCHHHHHHHHH
KRSRDRKGKLLTSVIRESINNF
HHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFMSSPPSKSIASSKMQGSALLTALFIMTLVAIVATAMSTRLQQDIYRTRLVIAQDKLYL
CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHH
ASQAVTFWALNELLDKNNRFTKTNQLGMVAQYPKNMESIYNQVQLSGGIFDLQARFNLNN
HHHHHHHHHHHHHHHCCCCEEECCCCCHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHHH
LIEKKSIPTLMHLISHTYSKATGQERANIALGVKHWLLAYDLGRGEDIYTSYYLAQKPPY
HHHHHCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCHHHEEEECCCCCC
YPSHQLIKSKSEFRLIKDVSAPAYIALEPFITALPESTSININTAPKQILMSLGDGLSDA
CCCHHHHHCHHHHHHHHHCCCCEEEEECHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCC
QANELITARGEDGITDLKEINELLKKFNIPSDQITIESQYYLSIAYAKNDEFSLVVYSLL
CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEEECCCCHHHHHHHHH
KRSRDRKGKLLTSVIRESINNF
HHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]