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The map label for this gene is rlpB [C]

Identifier: 54294235

GI number: 54294235

Start: 1451022

End: 1451513

Strand: Reverse

Name: rlpB [C]

Synonym: lpl1300

Alternate gene names: 54294235

Gene position: 1451513-1451022 (Counterclockwise)

Preceding gene: 54294236

Following gene: 54294234

Centisome position: 43.38

GC content: 38.01

Gene sequence:

>492_bases
ATGACTCAGATCCACAAGTACTTAGCATCTCTTATACTGATTTGGCTGCTAACTGGTTGTGGTTTTCATTTGCGTGGAGC
AATTGATATCCCTGAGTGGCTTGATAATGTTTCTATTATTTCCAGGGATGGAAATAAAGAACTGGTTTCTATACTCAAAT
CCCAGCTGGAAGGCTATAAAATTGATGTCAATTCTGACCCATCTCTCGCGAAATACTGGTTAATTATTAACAGTTCCAGT
TTACAGCAGCAAATTGTTAGCATTGGTGCAAGTACCAATCCAAGACAATATCAATTAATCTTAACCATTGAATTTATGTT
GCAGACTCCCAAAGGGCAAATTATTAAAACCCCCAGAAAAGTTAATGTGAGTCGTCAACTCACCGTGAATAATGACAGGA
TATTAGGGTCAAATGAAGAACAAGCTCTTTTAGTCAGCGAAATGAGGCGTGATGCCGCTATTCAAATCATTAATCGTTTA
AACCGACCATGA

Upstream 100 bases:

>100_bases
ACATGTGTGATTCGTCCCAGCAATCTCTAAATATTTTACACAATTTCTCAAGTTATGGGTGGCATTACCTGTAAGTGCAA
ATAAGAGAGGGAAAAGAAGA

Downstream 100 bases:

>100_bases
TATGCAAATAAATCAACAAGCTCTTACTCAGCTTTTACAAAAAAAAATACCTCATCTTAATGTACTAATTGGACAAGATC
ATTATCTTATTGACGAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Minor Lipoprotein

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MTQIHKYLASLILIWLLTGCGFHLRGAIDIPEWLDNVSIISRDGNKELVSILKSQLEGYKIDVNSDPSLAKYWLIINSSS
LQQQIVSIGASTNPRQYQLILTIEFMLQTPKGQIIKTPRKVNVSRQLTVNNDRILGSNEEQALLVSEMRRDAAIQIINRL
NRP

Sequences:

>Translated_163_residues
MTQIHKYLASLILIWLLTGCGFHLRGAIDIPEWLDNVSIISRDGNKELVSILKSQLEGYKIDVNSDPSLAKYWLIINSSS
LQQQIVSIGASTNPRQYQLILTIEFMLQTPKGQIIKTPRKVNVSRQLTVNNDRILGSNEEQALLVSEMRRDAAIQIINRL
NRP
>Mature_162_residues
TQIHKYLASLILIWLLTGCGFHLRGAIDIPEWLDNVSIISRDGNKELVSILKSQLEGYKIDVNSDPSLAKYWLIINSSSL
QQQIVSIGASTNPRQYQLILTIEFMLQTPKGQIIKTPRKVNVSRQLTVNNDRILGSNEEQALLVSEMRRDAAIQIINRLN
RP

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18481; Mature: 18350

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIHKYLASLILIWLLTGCGFHLRGAIDIPEWLDNVSIISRDGNKELVSILKSQLEGYK
CCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCEEEECCCCHHHHHHHHHHCCCEE
IDVNSDPSLAKYWLIINSSSLQQQIVSIGASTNPRQYQLILTIEFMLQTPKGQIIKTPRK
EECCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCEEECCCC
VNVSRQLTVNNDRILGSNEEQALLVSEMRRDAAIQIINRLNRP
CCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQIHKYLASLILIWLLTGCGFHLRGAIDIPEWLDNVSIISRDGNKELVSILKSQLEGYK
CHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCEEEECCCCHHHHHHHHHHCCCEE
IDVNSDPSLAKYWLIINSSSLQQQIVSIGASTNPRQYQLILTIEFMLQTPKGQIIKTPRK
EECCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCEEECCCC
VNVSRQLTVNNDRILGSNEEQALLVSEMRRDAAIQIINRLNRP
CCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA