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The map label for this gene is yhiR [C]

Identifier: 54294194

GI number: 54294194

Start: 1400164

End: 1401012

Strand: Reverse

Name: yhiR [C]

Synonym: lpl1258

Alternate gene names: 54294194

Gene position: 1401012-1400164 (Counterclockwise)

Preceding gene: 54294196

Following gene: 54294193

Centisome position: 41.88

GC content: 34.75

Gene sequence:

>849_bases
ATGCTCAGTTATCAACATGGCTATCATGCCGGAAATTTTGCTGATGTCATCAAGCACATCACCCTAACTCGACTATTGGC
TTATCTAACCCATAAAGATAAACCCTTATTCTATCTTGAAACCCATTCAGGTCGAGGGATATATGATTTAAAAGACAAGC
AGTCTTTAAAAACAGAAGAATATAAGGAAGGAATTAATCCAGTATGGCTCGATAGAGAGAATCTCCCCTCTCTTTTTCTT
GAATATATCAGTGTAATCAAGCAAATAAATCTTAATTCAACATTGCGTTATTATCCTGGTTCCCCCTATTTCGCAATCAA
TCAACTGCGCTCTCAAGACCGATTATACTTATGTGAATTACACCCAACAGAATATAATTTCTTATTAAAACTTCCTCATT
TTAATAAAAAAATTTATGTTAACCACACGGATGGAGTTTCAAAATTAAATGCCCTTTTGCCGCCACCGGAAAAACGTGGG
TTAATTTTTATTGATCCCTCATATGAAAGAAAAGAAGAATACAAAGAAATTCCATACGCTATAAAAAATGCTTACTCAAA
ATTCTCTACCGGCTTATATTGTGTTTGGTATCCTGTTGTCAATAAAGCATGGACTGAACAATTCTTGAGGAAAATGAGAG
AAATTAGTTCCAAATCGGTAAGGATTGAGCTTCATTTGAATCCACTCATTAATGAAGGAATGACTGGTTGTGGTCTTTGG
ATAATTAATCCTCCCTATACTTTCCCTTCAGAAATCAAGGCAGTTTTAGAGACATTAACAACTTATTTTAACCCTGGCTC
ATCTTCTTATATGATTGAATCAGGTTCAAAATTATGTCACGGGCTATAA

Upstream 100 bases:

>100_bases
AAAATAAAAGAGACCGCTTATGCAAGAAGTCTAATATGCGGCTACAGCATAAACCATTATTTTGATATAATTTGGAAAAT
ATCTTTTGAAGCCCTCTTTC

Downstream 100 bases:

>100_bases
ATTATGACTATCCTGCCAATTTCGGCTTTTTCAGATAATTATATTTGGACCTTTATTGATAAAATAGCTGGCGTATTAGA
TTGCGTCGATCCGGGAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MLSYQHGYHAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDKQSLKTEEYKEGINPVWLDRENLPSLFL
EYISVIKQINLNSTLRYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKIYVNHTDGVSKLNALLPPPEKRG
LIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISSKSVRIELHLNPLINEGMTGCGLW
IINPPYTFPSEIKAVLETLTTYFNPGSSSYMIESGSKLCHGL

Sequences:

>Translated_282_residues
MLSYQHGYHAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDKQSLKTEEYKEGINPVWLDRENLPSLFL
EYISVIKQINLNSTLRYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKIYVNHTDGVSKLNALLPPPEKRG
LIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISSKSVRIELHLNPLINEGMTGCGLW
IINPPYTFPSEIKAVLETLTTYFNPGSSSYMIESGSKLCHGL
>Mature_282_residues
MLSYQHGYHAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDKQSLKTEEYKEGINPVWLDRENLPSLFL
EYISVIKQINLNSTLRYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKIYVNHTDGVSKLNALLPPPEKRG
LIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISSKSVRIELHLNPLINEGMTGCGLW
IINPPYTFPSEIKAVLETLTTYFNPGSSSYMIESGSKLCHGL

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=279, Percent_Identity=40.1433691756272, Blast_Score=214, Evalue=4e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32833; Mature: 32833

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYQHGYHAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDKQSLKTEE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCHHCCHHH
YKEGINPVWLDRENLPSLFLEYISVIKQINLNSTLRYYPGSPYFAINQLRSQDRLYLCEL
HHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCEEEEEE
HPTEYNFLLKLPHFNKKIYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYA
CCCCEEEEEECCCCCCEEEEEECCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCHH
IKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISSKSVRIELHLNPLINEGMTGCGLW
HHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHCCCCCCEEE
IINPPYTFPSEIKAVLETLTTYFNPGSSSYMIESGSKLCHGL
EECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCC
>Mature Secondary Structure
MLSYQHGYHAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDKQSLKTEE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCHHCCHHH
YKEGINPVWLDRENLPSLFLEYISVIKQINLNSTLRYYPGSPYFAINQLRSQDRLYLCEL
HHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCEEEEEE
HPTEYNFLLKLPHFNKKIYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYA
CCCCEEEEEECCCCCCEEEEEECCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCHH
IKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISSKSVRIELHLNPLINEGMTGCGLW
HHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHCCCCCCEEE
IINPPYTFPSEIKAVLETLTTYFNPGSSSYMIESGSKLCHGL
EECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]