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The map label for this gene is 54294002

Identifier: 54294002

GI number: 54294002

Start: 1191183

End: 1191674

Strand: Reverse

Name: 54294002

Synonym: lpl1063

Alternate gene names: NA

Gene position: 1191674-1191183 (Counterclockwise)

Preceding gene: 54294005

Following gene: 54294001

Centisome position: 35.62

GC content: 36.99

Gene sequence:

>492_bases
ATGAGTAAGGGACCCTATCAAACGTTTGCTAACCGCTTGATTAGCACCCTCAAAGAGAAAGGATATTCAGCCTCTCGCTC
GCCAAATGGAATATGTATTAAAACCCTGGCTGAGTTTACTGGCGCCTCTGAACAAATCTGCCGCCGTTATATACGAGGTG
ATGCTTTACCTGACTATGAAAAAATCAAAAAACTGGCTTATCATCTTCAGGTAAGCCCAGGCTGGTTGCTGTTTGGTGAT
GATGAAAATACAACTTATAAGAAAAATGAAATAGATGAAACATTACTTCATTACATTTTGAAACAAAGTCATCATTTATA
CCCCGTCTCTCATGGAGCTAATGACGATTACGCAGATTTTGTGTTAGGATTGATCAAAGAAGTAAAAACAATCGACACTT
CGGAAAATAATTTACTAAAAATCATAGACTTGGCCATTGGTTCAATTTCTTCTTACGAAGAAAATAGAAAAAAGCACAGT
CATGGAATTTAA

Upstream 100 bases:

>100_bases
ACATGTATTAAAGATATTTTTATTAAAATACGATATGATATTGAATGATATCGTTTTATATGATAATTTTTTTATGATGC
TTGATTACAAGGATAATTTT

Downstream 100 bases:

>100_bases
AATATTTGTAGTTATGGATGTAACAGCTGTGGAAGTAAAGCTTCACCCCAAAGCCAAGGAATTTCTGTTTGAACACTTTG
TCACAATACGCAGGGTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSKGPYQTFANRLISTLKEKGYSASRSPNGICIKTLAEFTGASEQICRRYIRGDALPDYEKIKKLAYHLQVSPGWLLFGD
DENTTYKKNEIDETLLHYILKQSHHLYPVSHGANDDYADFVLGLIKEVKTIDTSENNLLKIIDLAIGSISSYEENRKKHS
HGI

Sequences:

>Translated_163_residues
MSKGPYQTFANRLISTLKEKGYSASRSPNGICIKTLAEFTGASEQICRRYIRGDALPDYEKIKKLAYHLQVSPGWLLFGD
DENTTYKKNEIDETLLHYILKQSHHLYPVSHGANDDYADFVLGLIKEVKTIDTSENNLLKIIDLAIGSISSYEENRKKHS
HGI
>Mature_162_residues
SKGPYQTFANRLISTLKEKGYSASRSPNGICIKTLAEFTGASEQICRRYIRGDALPDYEKIKKLAYHLQVSPGWLLFGDD
ENTTYKKNEIDETLLHYILKQSHHLYPVSHGANDDYADFVLGLIKEVKTIDTSENNLLKIIDLAIGSISSYEENRKKHSH
GI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18478; Mature: 18347

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGPYQTFANRLISTLKEKGYSASRSPNGICIKTLAEFTGASEQICRRYIRGDALPDYE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHH
KIKKLAYHLQVSPGWLLFGDDENTTYKKNEIDETLLHYILKQSHHLYPVSHGANDDYADF
HHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHH
VLGLIKEVKTIDTSENNLLKIIDLAIGSISSYEENRKKHSHGI
HHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKGPYQTFANRLISTLKEKGYSASRSPNGICIKTLAEFTGASEQICRRYIRGDALPDYE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHH
KIKKLAYHLQVSPGWLLFGDDENTTYKKNEIDETLLHYILKQSHHLYPVSHGANDDYADF
HHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHH
VLGLIKEVKTIDTSENNLLKIIDLAIGSISSYEENRKKHSHGI
HHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA