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The map label for this gene is yueD [H]

Identifier: 54293694

GI number: 54293694

Start: 847800

End: 848561

Strand: Direct

Name: yueD [H]

Synonym: lpl0747

Alternate gene names: 54293694

Gene position: 847800-848561 (Clockwise)

Preceding gene: 54293690

Following gene: 54293695

Centisome position: 25.34

GC content: 42.65

Gene sequence:

>762_bases
GTGTATCTCATTACTGGTGGTGGTAGCGGCATAGGAAGAGCTTTGGCGTTTGCTTTGGCAAAACGCAATAAACAGGTGTG
CATAGTGGGGCGCAGGGAAAAATTACTGCAAGAAACCGCTTCCTTATATGCAAACATTCATTATTTATGTGCCGATGTCT
CCACTCCTCAAGGCAGAGAGTTAATCAAAGCCAGTTTAAGTGCCACACCTCAAATTGATGGTTTGATAAACAATGCAGGA
ACTCTGGAGCCTACACTGCTTTTAAAAGATATGTCTTTTGCCGAGTGGCACCAGGCATTAAACACCAATATAGACGCGGC
ACTTTTTCTTCCACAACTTTTGTATGATAAATTGTCAGGTGGCAGAGTATTGAATGTAGGTTCAGCTGCCGCTTATTTTC
CTATCAAAGGATGGGGGGCTTATTGTGTATCGAAAGCGGCTTTGGCTATGTTAACACGATGCTGGCAGATTGAGTGCGAT
TCACTGGCCTTTGCCAGCGTAATGCCTGGAATTATCGATACTCATATGCAGGCGATAGCCCGAAACGGGATTAATCTTGA
TCCGGAACAGGTCAATTTTTATAGGCGTTTAAAAGATCATAATCGTTTGATATCACCCGAAACAGTAGCAGAATTTTTTA
TTTGGCTGCTGTTAGATATTGATAATGAAACGTATGTATCCAAAGAGTGGGATATATATGACACGACTCACCACTCTGCC
TGGTTGAAACCGCCTCACCAGGTACTTCATTGGGAATTTTAA

Upstream 100 bases:

>100_bases
GTCGCTTTTTTCTTGTTCTAAAATAAAATGTGCAGGTTATGCAAGAAGTCTAATGTCTGGTATTATTTCACCTATCGTTT
TCTATATTGATGAGGAAATT

Downstream 100 bases:

>100_bases
TGTTTGCCTGTGATGAATTATTGCTCAATGCAAGCACAATCGATGCCACAGGGTTGCAACTTTATAATCAAGCCATTGTT
ATAAGAAAAGGCAGAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MYLITGGGSGIGRALAFALAKRNKQVCIVGRREKLLQETASLYANIHYLCADVSTPQGRELIKASLSATPQIDGLINNAG
TLEPTLLLKDMSFAEWHQALNTNIDAALFLPQLLYDKLSGGRVLNVGSAAAYFPIKGWGAYCVSKAALAMLTRCWQIECD
SLAFASVMPGIIDTHMQAIARNGINLDPEQVNFYRRLKDHNRLISPETVAEFFIWLLLDIDNETYVSKEWDIYDTTHHSA
WLKPPHQVLHWEF

Sequences:

>Translated_253_residues
MYLITGGGSGIGRALAFALAKRNKQVCIVGRREKLLQETASLYANIHYLCADVSTPQGRELIKASLSATPQIDGLINNAG
TLEPTLLLKDMSFAEWHQALNTNIDAALFLPQLLYDKLSGGRVLNVGSAAAYFPIKGWGAYCVSKAALAMLTRCWQIECD
SLAFASVMPGIIDTHMQAIARNGINLDPEQVNFYRRLKDHNRLISPETVAEFFIWLLLDIDNETYVSKEWDIYDTTHHSA
WLKPPHQVLHWEF
>Mature_253_residues
MYLITGGGSGIGRALAFALAKRNKQVCIVGRREKLLQETASLYANIHYLCADVSTPQGRELIKASLSATPQIDGLINNAG
TLEPTLLLKDMSFAEWHQALNTNIDAALFLPQLLYDKLSGGRVLNVGSAAAYFPIKGWGAYCVSKAALAMLTRCWQIECD
SLAFASVMPGIIDTHMQAIARNGINLDPEQVNFYRRLKDHNRLISPETVAEFFIWLLLDIDNETYVSKEWDIYDTTHHSA
WLKPPHQVLHWEF

Specific function: Reduces benzil stereospecifically to (S)-benzoin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI5031737, Length=212, Percent_Identity=31.1320754716981, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1788459, Length=234, Percent_Identity=25.2136752136752, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787335, Length=181, Percent_Identity=30.3867403314917, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787526, Length=229, Percent_Identity=24.0174672489083, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=184, Percent_Identity=32.6086956521739, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=256, Percent_Identity=29.296875, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71994600, Length=233, Percent_Identity=28.3261802575107, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=238, Percent_Identity=28.1512605042017, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=27.9850746268657, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=255, Percent_Identity=27.4509803921569, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=236, Percent_Identity=30.0847457627119, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=238, Percent_Identity=30.672268907563, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=186, Percent_Identity=32.7956989247312, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=210, Percent_Identity=31.4285714285714, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=28.3524904214559, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=190, Percent_Identity=28.4210526315789, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=248, Percent_Identity=27.8225806451613, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17570069, Length=183, Percent_Identity=31.6939890710383, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=27.0992366412214, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322226, Length=228, Percent_Identity=28.9473684210526, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6322227, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=7e-13,
Organism=Drosophila melanogaster, GI21357041, Length=226, Percent_Identity=32.7433628318584, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI23397609, Length=229, Percent_Identity=32.3144104803493, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI28571526, Length=230, Percent_Identity=30.4347826086957, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24643142, Length=184, Percent_Identity=31.5217391304348, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24644339, Length=212, Percent_Identity=27.8301886792453, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28293; Mature: 28293

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLITGGGSGIGRALAFALAKRNKQVCIVGRREKLLQETASLYANIHYLCADVSTPQGRE
CEEEECCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHEEEECCCCCHHH
LIKASLSATPQIDGLINNAGTLEPTLLLKDMSFAEWHQALNTNIDAALFLPQLLYDKLSG
HHHHHHCCCCCCCHHHCCCCCCCHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC
GRVLNVGSAAAYFPIKGWGAYCVSKAALAMLTRCWQIECDSLAFASVMPGIIDTHMQAIA
CEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHH
RNGINLDPEQVNFYRRLKDHNRLISPETVAEFFIWLLLDIDNETYVSKEWDIYDTTHHSA
HCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCEEECCCCCCEECCCCCC
WLKPPHQVLHWEF
CCCCCHHHCCCCC
>Mature Secondary Structure
MYLITGGGSGIGRALAFALAKRNKQVCIVGRREKLLQETASLYANIHYLCADVSTPQGRE
CEEEECCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHEEEECCCCCHHH
LIKASLSATPQIDGLINNAGTLEPTLLLKDMSFAEWHQALNTNIDAALFLPQLLYDKLSG
HHHHHHCCCCCCCHHHCCCCCCCHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC
GRVLNVGSAAAYFPIKGWGAYCVSKAALAMLTRCWQIECDSLAFASVMPGIIDTHMQAIA
CEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHH
RNGINLDPEQVNFYRRLKDHNRLISPETVAEFFIWLLLDIDNETYVSKEWDIYDTTHHSA
HCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCEEECCCCCCEECCCCCC
WLKPPHQVLHWEF
CCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]