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The map label for this gene is sufD [C]

Identifier: 54293586

GI number: 54293586

Start: 689255

End: 690541

Strand: Direct

Name: sufD [C]

Synonym: lpl0638

Alternate gene names: 54293586

Gene position: 689255-690541 (Clockwise)

Preceding gene: 54293585

Following gene: 54293587

Centisome position: 20.6

GC content: 39.78

Gene sequence:

>1287_bases
ATGAGTGATATTTTGGATTATTATCAACAGCAAGCCCAATCAGGCGTATCGCAAATACCCTGGCTTGCGCAGTTGCAGTC
TAAAGCATTAACTGATTTGAAGCGCCGTGGTTTTCCCACCCGATATGATGAGGAATGGAAGTACACTCTCGTTGACTCAC
TATTACAGCAACATTTTGTACTACCTGATCCTACAGTAAAGCCTGCTCTTAAAACCGCCTTTGACGATTCACCAGTCAAA
AACCTGTTTTTAATACAGAATGGATTTATTTCCCAAGAGCAAGAATGGATTAAGAATCTGCCTGAAGGCGTGTTAATTCT
GCCTTTATCTCTTGCTTTAATAAATTACGCTGATTTGGTTAAGCCTTACCTTGGAAAAATTGTAGAGCAGGAGCATGGGT
TTCATTATCTAAATACAGCTATGCTCCAATGCGGAGTCTTTATTTATATTCCTGCGGGAATTTGTTTGGAAGAACCCATT
GTTTTAAAGCATATCCAGGATCAAACGAACCAGGCTATGTATTTAAGGCATCTGATCCTTATGGAAAAAGAATCTCAGGC
TACTCTGATTGAAGAATATCAAGGCGAAGAAAACATTTGCTATTTCACTAACAGTATTACTGAAGTGTTTCTTGGAGCAG
GAGCAAAACTTAATCATTATAAAATTCAAAAAGAAAGTAAATCAGCTTACCATTTAGGTCATTTATCAGTTAGGCAATCT
GCCGCCAGTCAATTTTCCAGCCACTCTTTAAGTTTGGGTGGGAAGTTGGTACGCAGTGATATTAGCGTGTTCATGCAGGA
AGAACAGGCTCAATGCCTTATGAATGGAATTTACGCTCCGGGGGATGGGCAACACATAGATCATCATACTGTAGTTCATC
ATTTAGTGCCTAACTGCCGAAGTGATCAAGATTACAAAGGAATTTTAACAGGACATTCCAGAGCGGTATTTAATGGCAAG
GTTATTGTAGCCAAGAATGCGCAACATACTGATGCCAAGCAACAAAATAAAAATTTACTTCTCTCCGCAAATGCTGAAAT
TGATACCAAACCGCAATTAGAGATTTTCGCCGATGACGTGTTATGTTCACATGGTGCTACGGTTGGGCAACTGGATGAAG
AGGCAATATTTTACCTGGCAACACGTGGTATTAGCCGGGATGAAGCTTCTCATTATTTGATCCAGGCATTTGCCAATGAT
AATTTGCGCCTTATTCCAAATCGTGATTTGGCTGATTGGATGGGTAATTTATTAACTCAACAGTTGGGGTACGCAAATGA
GTACTAA

Upstream 100 bases:

>100_bases
ATGTCTTGGCAAATGGTCGTATTATTACGTCAGGGGATAAATCTTTGGCGCTGGAACTGGAGAAAAAAGGTTATAGCTGG
CTTGAAGAAGTGGAGCAGTT

Downstream 100 bases:

>100_bases
TCCTTCATTAATGACATCCTTTGATGTCAACAAAATCAGGAAAGATTTCCCTGTATTGCATCAGAAAATCAATGAGTATG
ATTTGGTGTATTTTGATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFDDSPVK
NLFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYADLVKPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPI
VLKHIQDQTNQAMYLRHLILMEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQS
AASQFSSHSLSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVPNCRSDQDYKGILTGHSRAVFNGK
VIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFAND
NLRLIPNRDLADWMGNLLTQQLGYANEY

Sequences:

>Translated_428_residues
MSDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFDDSPVK
NLFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYADLVKPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPI
VLKHIQDQTNQAMYLRHLILMEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQS
AASQFSSHSLSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVPNCRSDQDYKGILTGHSRAVFNGK
VIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFAND
NLRLIPNRDLADWMGNLLTQQLGYANEY
>Mature_427_residues
SDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFDDSPVKN
LFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYADLVKPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPIV
LKHIQDQTNQAMYLRHLILMEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQSA
ASQFSSHSLSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVPNCRSDQDYKGILTGHSRAVFNGKV
IVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDVLCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDN
LRLIPNRDLADWMGNLLTQQLGYANEY

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=369, Percent_Identity=32.2493224932249, Blast_Score=178, Evalue=6e-46,
Organism=Escherichia coli, GI87081955, Length=320, Percent_Identity=23.4375, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 48287; Mature: 48156

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFV
CCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
LPDPTVKPALKTAFDDSPVKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYADLV
CCCCCCCHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
KPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMYLRHLIL
HHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQS
HCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHH
AASQFSSHSLSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVPNCR
HHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC
SDQDYKGILTGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDV
CCCCCCCEEECCCEEEECCEEEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCEEEHHHH
LCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPNRDLADWMGNLLTQ
HHHCCCCCCCCCHHHEEEHHHCCCCCCHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHH
QLGYANEY
HHCCCCCC
>Mature Secondary Structure 
SDILDYYQQQAQSGVSQIPWLAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFV
CHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
LPDPTVKPALKTAFDDSPVKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYADLV
CCCCCCCHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
KPYLGKIVEQEHGFHYLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQAMYLRHLIL
HHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MEKESQATLIEEYQGEENICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQS
HCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHH
AASQFSSHSLSLGGKLVRSDISVFMQEEQAQCLMNGIYAPGDGQHIDHHTVVHHLVPNCR
HHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC
SDQDYKGILTGHSRAVFNGKVIVAKNAQHTDAKQQNKNLLLSANAEIDTKPQLEIFADDV
CCCCCCCEEECCCEEEECCEEEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCEEEHHHH
LCSHGATVGQLDEEAIFYLATRGISRDEASHYLIQAFANDNLRLIPNRDLADWMGNLLTQ
HHHCCCCCCCCCHHHEEEHHHCCCCCCHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHH
QLGYANEY
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]