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The map label for this gene is spmB [H]

Identifier: 54293557

GI number: 54293557

Start: 655962

End: 656495

Strand: Direct

Name: spmB [H]

Synonym: lpl0609

Alternate gene names: 54293557

Gene position: 655962-656495 (Clockwise)

Preceding gene: 54293556

Following gene: 54293559

Centisome position: 19.61

GC content: 38.58

Gene sequence:

>534_bases
ATGAATGGATTCGCTAATCATTTATCCAATTGGTTGTTTTTGACTTTCATCGTTGGTATCCCTTTGTACGCTGCAATTAA
AAAAGTAAATGTATTTGATGCTTTCATAATTGGAGCAAAACAAGGTTTTGATGTGAGCGTAAAGCTTATACCTTATCTAG
TTGCGATGATGGTTGCTATTGGCATGTTAAGAGCTTCGGGGTTTTTTTCCTTAATGAGTCAGATCTTATCGCCAGCGTTG
GCTATGATAGGAATGCCTTCCGAATTATTACCTTTAGCTCTTATCAGACCATTCTCTGGAAGTGCTTCAACAGGAGTTAT
GGCAGAGCTGATTCATAAATACGGAGGGGATTCATTCATCGCAAAAACCGCAGCAACAATGATGGGAAGTACAGAGACTA
CTTTTTATGTGATTGCCGTTTATTTTGGCTCTGTGGGTATCAGAAGAACAAGACATGCTATTCCTGCTGGATTATTGGCA
GATTTAGCTGGAATCATTGCCTCGGTTTTGATTTGTCGATATTTATTTACATGA

Upstream 100 bases:

>100_bases
CTTCTTTGATCGCGACTACTGTATCTACTCTGGTAGCTATCGTTGCTGTAAAACAATTGGCTAAATTACCGCGATTTAAA
ATTGAAAGGACAGACAGCTT

Downstream 100 bases:

>100_bases
TATAAGATTTTTTTAACACAAAAAGAGTAACGTTATGTTTGAATTACTTGGGAGCTTAGTCGCTTTATAAAGAAGTGTCT
GCTGTCATTTAGATTAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MNGFANHLSNWLFLTFIVGIPLYAAIKKVNVFDAFIIGAKQGFDVSVKLIPYLVAMMVAIGMLRASGFFSLMSQILSPAL
AMIGMPSELLPLALIRPFSGSASTGVMAELIHKYGGDSFIAKTAATMMGSTETTFYVIAVYFGSVGIRRTRHAIPAGLLA
DLAGIIASVLICRYLFT

Sequences:

>Translated_177_residues
MNGFANHLSNWLFLTFIVGIPLYAAIKKVNVFDAFIIGAKQGFDVSVKLIPYLVAMMVAIGMLRASGFFSLMSQILSPAL
AMIGMPSELLPLALIRPFSGSASTGVMAELIHKYGGDSFIAKTAATMMGSTETTFYVIAVYFGSVGIRRTRHAIPAGLLA
DLAGIIASVLICRYLFT
>Mature_177_residues
MNGFANHLSNWLFLTFIVGIPLYAAIKKVNVFDAFIIGAKQGFDVSVKLIPYLVAMMVAIGMLRASGFFSLMSQILSPAL
AMIGMPSELLPLALIRPFSGSASTGVMAELIHKYGGDSFIAKTAATMMGSTETTFYVIAVYFGSVGIRRTRHAIPAGLLA
DLAGIIASVLICRYLFT

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG0700

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spmB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 18965; Mature: 18965

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFANHLSNWLFLTFIVGIPLYAAIKKVNVFDAFIIGAKQGFDVSVKLIPYLVAMMVAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHH
GMLRASGFFSLMSQILSPALAMIGMPSELLPLALIRPFSGSASTGVMAELIHKYGGDSFI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHH
AKTAATMMGSTETTFYVIAVYFGSVGIRRTRHAIPAGLLADLAGIIASVLICRYLFT
HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNGFANHLSNWLFLTFIVGIPLYAAIKKVNVFDAFIIGAKQGFDVSVKLIPYLVAMMVAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHH
GMLRASGFFSLMSQILSPALAMIGMPSELLPLALIRPFSGSASTGVMAELIHKYGGDSFI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHH
AKTAATMMGSTETTFYVIAVYFGSVGIRRTRHAIPAGLLADLAGIIASVLICRYLFT
HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 1548223; 7642500 [H]