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The map label for this gene is 54293478

Identifier: 54293478

GI number: 54293478

Start: 574450

End: 575019

Strand: Direct

Name: 54293478

Synonym: lpl0527

Alternate gene names: NA

Gene position: 574450-575019 (Clockwise)

Preceding gene: 54293477

Following gene: 54293480

Centisome position: 17.17

GC content: 37.02

Gene sequence:

>570_bases
ATGGAATATCTAACGCCCAGAGGATTGATTCCTTTTATAACCGAACTCAAAGCGCTTAATATTCTGCAACAAGATGATAA
TACTAATATTGCTCTCGTATCAGAAATTTTAGCACGCTGGGTTGTAGATAAAGACTGGCTGGATGAAAAATTTTACTATG
TTAATCCAGAGGTTGGCTTTAACTCCTGGTTAATTCATGAAGAAAAAGATCATACTTTAGCAGTTAATATCGTTGCCTGG
CAGTCAGGACGAGAAATTACTCCGCATGATCACCAGACTTGGGGTGTTGTGGGTAGTATAATAGGTGTTGAAAAAAATTA
TTTTTGGAAAAGAATGGATGATGGTTCAAAGCCAGGGTATGCCGAGATCATAAGAGAAAAAACGGCTATTATACGTCCCG
CTGGTGGGGTAATTGGTTTTTTGCCTAATGACATTCACAGTGTTATGAATGAATCAGATGATGTAGCAATTTCACTGCAT
GTTTATGGAAAAAATTCGAATTATACAGGTCGCCATCAGTACGACCCGGTTAACAATTTAATGCAACCATTTATAGTAAA
TTATAGTTAG

Upstream 100 bases:

>100_bases
GCAATTCTTGCATTGCTAAATTTCATTTCATGCTAAAGTGAATGTACATAAAAGATAAATTATCTCTTATCTGAATGTTT
ACTCAATAAAATGGTGAATC

Downstream 100 bases:

>100_bases
GTTGATATTTATCAGTGTCATTATGCTTTCAATACTGCCAAATTGCCGTTTATTAACGCAGGTCTTGTAAATTGATATTA
AACTCTTTGTTAAAACATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Cysteine Dioxygenase Type I Protein; Cysteine Dioxygenase Type I Superfamily; Cupin Region; Cysteine Dioxygenase; Cytoplasmic Protein; Cupin 2 Domain-Containing Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MEYLTPRGLIPFITELKALNILQQDDNTNIALVSEILARWVVDKDWLDEKFYYVNPEVGFNSWLIHEEKDHTLAVNIVAW
QSGREITPHDHQTWGVVGSIIGVEKNYFWKRMDDGSKPGYAEIIREKTAIIRPAGGVIGFLPNDIHSVMNESDDVAISLH
VYGKNSNYTGRHQYDPVNNLMQPFIVNYS

Sequences:

>Translated_189_residues
MEYLTPRGLIPFITELKALNILQQDDNTNIALVSEILARWVVDKDWLDEKFYYVNPEVGFNSWLIHEEKDHTLAVNIVAW
QSGREITPHDHQTWGVVGSIIGVEKNYFWKRMDDGSKPGYAEIIREKTAIIRPAGGVIGFLPNDIHSVMNESDDVAISLH
VYGKNSNYTGRHQYDPVNNLMQPFIVNYS
>Mature_189_residues
MEYLTPRGLIPFITELKALNILQQDDNTNIALVSEILARWVVDKDWLDEKFYYVNPEVGFNSWLIHEEKDHTLAVNIVAW
QSGREITPHDHQTWGVVGSIIGVEKNYFWKRMDDGSKPGYAEIIREKTAIIRPAGGVIGFLPNDIHSVMNESDDVAISLH
VYGKNSNYTGRHQYDPVNNLMQPFIVNYS

Specific function: Unknown

COG id: COG5553

COG function: function code R; Predicted metal-dependent enzyme of the double-stranded beta helix superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21660; Mature: 21660

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYLTPRGLIPFITELKALNILQQDDNTNIALVSEILARWVVDKDWLDEKFYYVNPEVGF
CCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
NSWLIHEEKDHTLAVNIVAWQSGREITPHDHQTWGVVGSIIGVEKNYFWKRMDDGSKPGY
CEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCH
AEIIREKTAIIRPAGGVIGFLPNDIHSVMNESDDVAISLHVYGKNSNYTGRHQYDPVNNL
HHHHHHHHHEEECCCCEEEECCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCHHHH
MQPFIVNYS
CCCEEECCC
>Mature Secondary Structure
MEYLTPRGLIPFITELKALNILQQDDNTNIALVSEILARWVVDKDWLDEKFYYVNPEVGF
CCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
NSWLIHEEKDHTLAVNIVAWQSGREITPHDHQTWGVVGSIIGVEKNYFWKRMDDGSKPGY
CEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCH
AEIIREKTAIIRPAGGVIGFLPNDIHSVMNESDDVAISLHVYGKNSNYTGRHQYDPVNNL
HHHHHHHHHEEECCCCEEEECCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCHHHH
MQPFIVNYS
CCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA