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The map label for this gene is 54293421

Identifier: 54293421

GI number: 54293421

Start: 513368

End: 513799

Strand: Direct

Name: 54293421

Synonym: lpl0470

Alternate gene names: NA

Gene position: 513368-513799 (Clockwise)

Preceding gene: 54293415

Following gene: 54293423

Centisome position: 15.34

GC content: 37.04

Gene sequence:

>432_bases
TTGTTTTGCATTGATGATCAGATTAAGTCGTCTTCTTTTATACTTGGAGAGTGGGCTTTATCTACGGTTCTTTTAAAAAA
TGACGCCTCATACCCCTGGTTTATTTTGGTTCCAAGAAAAATGGATATTCAAGAAATTTATCAGCTTGAAAAGAGCGAGC
GATTTTTATTAATTGAGGAAATCAATCAACTGTCTCTTCTGGTTAGTGATTACTTTAAACCAGACAAGCTTAATATAGGC
GCTCTTGGCAATATTGTTCCGCAATTGCATATCCATATTGTTATTCGCAGAAAAAATGATCCTTTGTGGCCTCAAGGTAT
TTGGCAATCTTCCATGCCTTCTATTCCTTACCCTGAAAGTGAATTAAAGAGTCTGCTGCCTACCTTGGGTGATTTAGTCA
GGGCTTACGATAAACCCCAATCTCTTTGTTAA

Upstream 100 bases:

>100_bases
CATTACTCAATAGGTTTATTAAAATTTATCTGTAATTCTTATAATCTGAAGGTCTTGTTTTTGTTATAATGATTGAGTAC
TTATTGACAGAGAGAGAATT

Downstream 100 bases:

>100_bases
AAAATGTTTTTAACTCGGTCATTTAGTTTATCTAAACTCCCTCATTAAAAACATTTTTTGCCTCGACCTAGAGGTTCATC
GTAAGTCCTGTTAGTAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; HIT Family Protein; Diadenosine Tetraphosphate; HIT Domain-Containing Protein; HIT1 Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MFCIDDQIKSSSFILGEWALSTVLLKNDASYPWFILVPRKMDIQEIYQLEKSERFLLIEEINQLSLLVSDYFKPDKLNIG
ALGNIVPQLHIHIVIRRKNDPLWPQGIWQSSMPSIPYPESELKSLLPTLGDLVRAYDKPQSLC

Sequences:

>Translated_143_residues
MFCIDDQIKSSSFILGEWALSTVLLKNDASYPWFILVPRKMDIQEIYQLEKSERFLLIEEINQLSLLVSDYFKPDKLNIG
ALGNIVPQLHIHIVIRRKNDPLWPQGIWQSSMPSIPYPESELKSLLPTLGDLVRAYDKPQSLC
>Mature_143_residues
MFCIDDQIKSSSFILGEWALSTVLLKNDASYPWFILVPRKMDIQEIYQLEKSERFLLIEEINQLSLLVSDYFKPDKLNIG
ALGNIVPQLHIHIVIRRKNDPLWPQGIWQSSMPSIPYPESELKSLLPTLGDLVRAYDKPQSLC

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16515; Mature: 16515

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFCIDDQIKSSSFILGEWALSTVLLKNDASYPWFILVPRKMDIQEIYQLEKSERFLLIEE
CCCCCCCCCCCCEEEEHHHHHHHEEECCCCCCEEEEECCCCCHHHHHHHHCCCCEEEHHH
INQLSLLVSDYFKPDKLNIGALGNIVPQLHIHIVIRRKNDPLWPQGIWQSSMPSIPYPES
HHHHHHHHHHCCCCCCCCCCCHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHH
ELKSLLPTLGDLVRAYDKPQSLC
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFCIDDQIKSSSFILGEWALSTVLLKNDASYPWFILVPRKMDIQEIYQLEKSERFLLIEE
CCCCCCCCCCCCEEEEHHHHHHHEEECCCCCCEEEEECCCCCHHHHHHHHCCCCEEEHHH
INQLSLLVSDYFKPDKLNIGALGNIVPQLHIHIVIRRKNDPLWPQGIWQSSMPSIPYPES
HHHHHHHHHHCCCCCCCCCCCHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHH
ELKSLLPTLGDLVRAYDKPQSLC
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA