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The map label for this gene is aspC [H]

Identifier: 54293166

GI number: 54293166

Start: 238252

End: 239340

Strand: Direct

Name: aspC [H]

Synonym: lpl0212

Alternate gene names: 54293166

Gene position: 238252-239340 (Clockwise)

Preceding gene: 54293165

Following gene: 54293167

Centisome position: 7.12

GC content: 40.22

Gene sequence:

>1089_bases
ATGAAAAAAATAGCAACTTACACTATACAAGATTGGCTTTTTTCCATCGCGAATGGCCGATTTGACATTGATTTGGCAGA
GAGTGGGATCCAACCACATCGCATTCAGGACCTTTCATTTACTGAAAATTACGACTTAAACTACAGTGTGGATATTGGCC
AGGAACAATTGCGTCAGTGCATTGCGGATATGTATCAAGTTGACTTGGCAAGGGTAATGATTGCCAATGGTAGTCAGGAG
GCTTTGTATTTATTTTACCGATCATTTTTATCATCCGCTGACCATGTCATCACGTTTACTCCTGGATGGCAACAATCCTG
GGAAGTACCAAACTACATTGGCTGTGCGGTTACAAAAATCCCATTGACTCGGGAAACAGGCTATAAGATCGATATGGCAC
AAATTATTGATTCGTTAAGACCAAATACCAAGCTCATTGTTTTAACCTCCCCTAATAATCCATTAGGTATTACTTGTCAT
CCTGTCGATTTAGAAAAGTTATATGAGCTGTGTTGTGAAAAGGGTATTTTTTTATTGAATGACGAAGAATATTTAACTGA
CTACACGCAAAGCATTGTCCAATTTGGAAGGTTAACAGGTGCTGTTAGTAGTTTATCCAAAATTTATGGTTATCCCGGTT
TGAGGGTCGGCTGGTTTATAGGAACCCCTTCTTTAATCCAGGATATGGTTAATTACAAGCGTTATACTACAGTGACAAAT
TCATCTCTTTGCGAATTTTTGGCGTTAGAAGTGCTTAAAAACAGAAAACAGTATGTGTCTGATTATCAAGCAATGAGCGC
ACAAGGTGAGAGCCTTTTAAGGGAGTTTGTCGCACGATGGCCCGAATGCGATATGATTTCGCCTCAAGGTACGCCTTTTG
CCTATATCACCTTGCCTAAGACATGGAATTCCGCCCAATTTTGTCAGCAACTGCTCGCACAGCATCACGTGTTAATCATG
CCAGCTGAAGTTTTTGAAGACAAACATGCCTTGCGAATTTCATTTGGGCGCCCTCAAGGCCTATTACGTAAAGGTCTGGA
AAAACTAGACGAATTCATTAATTTTTACCGGGTGCAATATGCCAATTAA

Upstream 100 bases:

>100_bases
CAGGGCGAATTATTATGCGAATTAAATGGCAATCGTGTTCTTTTAACGGGTACTTGCCATTTGTATTTAGAAGGTAATAT
TTACATCCCAGAGATTTAAT

Downstream 100 bases:

>100_bases
ATTACTTTCCAAAATATTAGTATCGCAAGCTTTGCCTATCAAAATGCCCTTAAACATGGGCTGGGATCTTCCCAAGATTT
ATTCTAAAGGGCTAGATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKKIATYTIQDWLFSIANGRFDIDLAESGIQPHRIQDLSFTENYDLNYSVDIGQEQLRQCIADMYQVDLARVMIANGSQE
ALYLFYRSFLSSADHVITFTPGWQQSWEVPNYIGCAVTKIPLTRETGYKIDMAQIIDSLRPNTKLIVLTSPNNPLGITCH
PVDLEKLYELCCEKGIFLLNDEEYLTDYTQSIVQFGRLTGAVSSLSKIYGYPGLRVGWFIGTPSLIQDMVNYKRYTTVTN
SSLCEFLALEVLKNRKQYVSDYQAMSAQGESLLREFVARWPECDMISPQGTPFAYITLPKTWNSAQFCQQLLAQHHVLIM
PAEVFEDKHALRISFGRPQGLLRKGLEKLDEFINFYRVQYAN

Sequences:

>Translated_362_residues
MKKIATYTIQDWLFSIANGRFDIDLAESGIQPHRIQDLSFTENYDLNYSVDIGQEQLRQCIADMYQVDLARVMIANGSQE
ALYLFYRSFLSSADHVITFTPGWQQSWEVPNYIGCAVTKIPLTRETGYKIDMAQIIDSLRPNTKLIVLTSPNNPLGITCH
PVDLEKLYELCCEKGIFLLNDEEYLTDYTQSIVQFGRLTGAVSSLSKIYGYPGLRVGWFIGTPSLIQDMVNYKRYTTVTN
SSLCEFLALEVLKNRKQYVSDYQAMSAQGESLLREFVARWPECDMISPQGTPFAYITLPKTWNSAQFCQQLLAQHHVLIM
PAEVFEDKHALRISFGRPQGLLRKGLEKLDEFINFYRVQYAN
>Mature_362_residues
MKKIATYTIQDWLFSIANGRFDIDLAESGIQPHRIQDLSFTENYDLNYSVDIGQEQLRQCIADMYQVDLARVMIANGSQE
ALYLFYRSFLSSADHVITFTPGWQQSWEVPNYIGCAVTKIPLTRETGYKIDMAQIIDSLRPNTKLIVLTSPNNPLGITCH
PVDLEKLYELCCEKGIFLLNDEEYLTDYTQSIVQFGRLTGAVSSLSKIYGYPGLRVGWFIGTPSLIQDMVNYKRYTTVTN
SSLCEFLALEVLKNRKQYVSDYQAMSAQGESLLREFVARWPECDMISPQGTPFAYITLPKTWNSAQFCQQLLAQHHVLIM
PAEVFEDKHALRISFGRPQGLLRKGLEKLDEFINFYRVQYAN

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI1786816, Length=327, Percent_Identity=22.6299694189602, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788722, Length=339, Percent_Identity=22.1238938053097, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71994476, Length=249, Percent_Identity=22.4899598393574, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994472, Length=249, Percent_Identity=22.4899598393574, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322401, Length=286, Percent_Identity=23.7762237762238, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 41485; Mature: 41485

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIATYTIQDWLFSIANGRFDIDLAESGIQPHRIQDLSFTENYDLNYSVDIGQEQLRQC
CCCCHHHHHHHHHHHHHCCCEEEEHHHCCCCCCEEECCCCCCCCCCEEEECCCHHHHHHH
IADMYQVDLARVMIANGSQEALYLFYRSFLSSADHVITFTPGWQQSWEVPNYIGCAVTKI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEC
PLTRETGYKIDMAQIIDSLRPNTKLIVLTSPNNPLGITCHPVDLEKLYELCCEKGIFLLN
CCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCEEEEC
DEEYLTDYTQSIVQFGRLTGAVSSLSKIYGYPGLRVGWFIGTPSLIQDMVNYKRYTTVTN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHEEECC
SSLCEFLALEVLKNRKQYVSDYQAMSAQGESLLREFVARWPECDMISPQGTPFAYITLPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC
TWNSAQFCQQLLAQHHVLIMPAEVFEDKHALRISFGRPQGLLRKGLEKLDEFINFYRVQY
CCCHHHHHHHHHHCCCEEEEEHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEE
AN
CC
>Mature Secondary Structure
MKKIATYTIQDWLFSIANGRFDIDLAESGIQPHRIQDLSFTENYDLNYSVDIGQEQLRQC
CCCCHHHHHHHHHHHHHCCCEEEEHHHCCCCCCEEECCCCCCCCCCEEEECCCHHHHHHH
IADMYQVDLARVMIANGSQEALYLFYRSFLSSADHVITFTPGWQQSWEVPNYIGCAVTKI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEC
PLTRETGYKIDMAQIIDSLRPNTKLIVLTSPNNPLGITCHPVDLEKLYELCCEKGIFLLN
CCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCEEEEC
DEEYLTDYTQSIVQFGRLTGAVSSLSKIYGYPGLRVGWFIGTPSLIQDMVNYKRYTTVTN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHEEECC
SSLCEFLALEVLKNRKQYVSDYQAMSAQGESLLREFVARWPECDMISPQGTPFAYITLPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC
TWNSAQFCQQLLAQHHVLIMPAEVFEDKHALRISFGRPQGLLRKGLEKLDEFINFYRVQY
CCCHHHHHHHHHHCCCEEEEEHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEE
AN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]