Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020468
Identifier: 54020468
GI number: 54020468
Start: 409368
End: 410828
Strand: Reverse
Name: 54020468
Synonym: mhp351
Alternate gene names: NA
Gene position: 410828-409368 (Counterclockwise)
Preceding gene: 54020469
Following gene: 54020467
Centisome position: 46.02
GC content: 23.27
Gene sequence:
>1461_bases ATGATTTGGCGGTTTCACATGTCATTCAATAACAAAAAATATTTATTTTTAGCACCTTCAATTGTTTTGCCATGGATTTT CCCAGCTATAATTTTTGCGCTTCAAAATAAAAATTACAATTTTGAAACAAAAACTTCAAACCCTACCAATAATGATTTGT TCACTATAAGCGCAAAGGATAGTAAAGCTTTAAAATCTAACATTTTTTCCTATAATGATTTAATACAAATGGATAAAACA AAGACTATTTGGCTTAAAAATAGTGACTGAATGCCGATTTTTTTGAACGACCATGAAAAAATTCAAGAAATAATCAAAAA ATATCTATATTTTGAAAGTGACAATTTTAAAACTTACAACGACAAGGAATTCAATAAATTGTCTACTTTTTTCTCCAAAG AGTATGACAAAGCTACTACTGAAGGCGAAAATTTCCAAAAATTAAAAGTAAATCCAAATTTTGGTGATTACCAAAAAATA TTTACTAAAAATTTTTTTATTATCGATGATTTTAACCAGTATGAGGAATTTTTTAAGGAATATGTTGACAAGCCAACCTT TTTAAAAAATGAATATGATAAAAATTTTTTTACTAAAAATTTATTATTTATATATATTGCCGAGAAAACATTAGCTAACC CGTTGCTTATAAATGAAAAGTATTTACCCACTAATTTGTCCCCTATTAAATTTCTGACTTATAAAAATCATAATTTTATT ATTTCACTACCAGAACAACTTTTTAATTATAAAGATGTAAGTAAAAATAGTAACAAAATTACAAAATTAGATGATAAATT TGATGTTTATTTTAAGGTTTATTCAAAAAACAATTTTCAAAAAACAAACGATTTATCAACTATAAAATTAAATAAAATTC AGGATTTATATTTGTATAACTTCTTAGATAAAACATCGTCAGAATTTGAGAGTTTTTTAGATCTAATGACCAAAAAAGAG AAAATTTTAGCGCGTAATAATTTGAAGATAACCACATTATATGGGTCCAAAAATGAACAATATTCAAAAGATGAACCCAA AACAGAAATTTTTTTAGATTTTGACGATGTAAAACAATTTATTTATAATAAAAATTTATCTAAAAACCTTGAATGAGAAG AAGCATTTCACCTCTCTAATTTATTTGTTCCCAGCAAAAATATTGATAAACCTGAAAGATTTAATAAATTCATTCTCAAA TCTCAAAAAGTAAATGAAATTTTTCTTGATGAAGTTTTTTATTCAGAAATTGATAAAAACTCAGGCAAAATTACACTTTA TTCTTTAAACTACAAATCAATTTTTCCAAAAACCTTAAAAAATATTGAAAAATTAAATAATAAAGATTTACTAATGTTTG AAAAAATTGATTTTGGTGATATAAATATTAAAAATGTTGAGTTAAAAACAGTAAATTCACTCGAAGAGTTTAATAATATA TATAAAAAAATACAAGGCTAG
Upstream 100 bases:
>100_bases TCAAATGTAGAATTAATAAGGTATAGAGCTGAAAAAACAGGAATTTATCGGTTAGTTGTTAAAAAACATAAATCCTCTTT GTTTGAAAATTCCATAGATG
Downstream 100 bases:
>100_bases TATGGATTTAAAAAAATATAAAAATTTTTTTCTAATAGGATTTATATTAACCAACTTAACCGCCGCTACCGTGGTTTCGC TTGGTTTGATTCTTAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MIWRFHMSFNNKKYLFLAPSIVLPWIFPAIIFALQNKNYNFETKTSNPTNNDLFTISAKDSKALKSNIFSYNDLIQMDKT KTIWLKNSDWMPIFLNDHEKIQEIIKKYLYFESDNFKTYNDKEFNKLSTFFSKEYDKATTEGENFQKLKVNPNFGDYQKI FTKNFFIIDDFNQYEEFFKEYVDKPTFLKNEYDKNFFTKNLLFIYIAEKTLANPLLINEKYLPTNLSPIKFLTYKNHNFI ISLPEQLFNYKDVSKNSNKITKLDDKFDVYFKVYSKNNFQKTNDLSTIKLNKIQDLYLYNFLDKTSSEFESFLDLMTKKE KILARNNLKITTLYGSKNEQYSKDEPKTEIFLDFDDVKQFIYNKNLSKNLEWEEAFHLSNLFVPSKNIDKPERFNKFILK SQKVNEIFLDEVFYSEIDKNSGKITLYSLNYKSIFPKTLKNIEKLNNKDLLMFEKIDFGDINIKNVELKTVNSLEEFNNI YKKIQG
Sequences:
>Translated_486_residues MIWRFHMSFNNKKYLFLAPSIVLPWIFPAIIFALQNKNYNFETKTSNPTNNDLFTISAKDSKALKSNIFSYNDLIQMDKT KTIWLKNSD*MPIFLNDHEKIQEIIKKYLYFESDNFKTYNDKEFNKLSTFFSKEYDKATTEGENFQKLKVNPNFGDYQKI FTKNFFIIDDFNQYEEFFKEYVDKPTFLKNEYDKNFFTKNLLFIYIAEKTLANPLLINEKYLPTNLSPIKFLTYKNHNFI ISLPEQLFNYKDVSKNSNKITKLDDKFDVYFKVYSKNNFQKTNDLSTIKLNKIQDLYLYNFLDKTSSEFESFLDLMTKKE KILARNNLKITTLYGSKNEQYSKDEPKTEIFLDFDDVKQFIYNKNLSKNLE*EEAFHLSNLFVPSKNIDKPERFNKFILK SQKVNEIFLDEVFYSEIDKNSGKITLYSLNYKSIFPKTLKNIEKLNNKDLLMFEKIDFGDINIKNVELKTVNSLEEFNNI YKKIQG >Mature_486_residues MIWRFHMSFNNKKYLFLAPSIVLPWIFPAIIFALQNKNYNFETKTSNPTNNDLFTISAKDSKALKSNIFSYNDLIQMDKT KTIWLKNSD*MPIFLNDHEKIQEIIKKYLYFESDNFKTYNDKEFNKLSTFFSKEYDKATTEGENFQKLKVNPNFGDYQKI FTKNFFIIDDFNQYEEFFKEYVDKPTFLKNEYDKNFFTKNLLFIYIAEKTLANPLLINEKYLPTNLSPIKFLTYKNHNFI ISLPEQLFNYKDVSKNSNKITKLDDKFDVYFKVYSKNNFQKTNDLSTIKLNKIQDLYLYNFLDKTSSEFESFLDLMTKKE KILARNNLKITTLYGSKNEQYSKDEPKTEIFLDFDDVKQFIYNKNLSKNLE*EEAFHLSNLFVPSKNIDKPERFNKFILK SQKVNEIFLDEVFYSEIDKNSGKITLYSLNYKSIFPKTLKNIEKLNNKDLLMFEKIDFGDINIKNVELKTVNSLEEFNNI YKKIQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57809; Mature: 57809
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWRFHMSFNNKKYLFLAPSIVLPWIFPAIIFALQNKNYNFETKTSNPTNNDLFTISAKD CEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCC SKALKSNIFSYNDLIQMDKTKTIWLKNSDMPIFLNDHEKIQEIIKKYLYFESDNFKTYND CHHHHHHCCCHHHHEEECCCEEEEEECCCCEEEECCHHHHHHHHHHHHEEECCCCCCCCC KEFNKLSTFFSKEYDKATTEGENFQKLKVNPNFGDYQKIFTKNFFIIDDFNQYEEFFKEY CHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCEEEEECHHHHHHHHHHH VDKPTFLKNEYDKNFFTKNLLFIYIAEKTLANPLLINEKYLPTNLSPIKFLTYKNHNFII CCCCCEECCCCCCCHHHCCEEEEEEECHHHCCCEEECCCCCCCCCCCEEEEEEECCCEEE SLPEQLFNYKDVSKNSNKITKLDDKFDVYFKVYSKNNFQKTNDLSTIKLNKIQDLYLYNF ECCHHHCCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHH LDKTSSEFESFLDLMTKKEKILARNNLKITTLYGSKNEQYSKDEPKTEIFLDFDDVKQFI HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHH YNKNLSKNLEEEAFHLSNLFVPSKNIDKPERFNKFILKSQKVNEIFLDEVFYSEIDKNSG HCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC KITLYSLNYKSIFPKTLKNIEKLNNKDLLMFEKIDFGDINIKNVELKTVNSLEEFNNIYK EEEEEEECCHHHCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEHHHHHHHHHHHH KIQG HHCC >Mature Secondary Structure MIWRFHMSFNNKKYLFLAPSIVLPWIFPAIIFALQNKNYNFETKTSNPTNNDLFTISAKD CEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCC SKALKSNIFSYNDLIQMDKTKTIWLKNSDMPIFLNDHEKIQEIIKKYLYFESDNFKTYND CHHHHHHCCCHHHHEEECCCEEEEEECCCCEEEECCHHHHHHHHHHHHEEECCCCCCCCC KEFNKLSTFFSKEYDKATTEGENFQKLKVNPNFGDYQKIFTKNFFIIDDFNQYEEFFKEY CHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCEEEEECHHHHHHHHHHH VDKPTFLKNEYDKNFFTKNLLFIYIAEKTLANPLLINEKYLPTNLSPIKFLTYKNHNFII CCCCCEECCCCCCCHHHCCEEEEEEECHHHCCCEEECCCCCCCCCCCEEEEEEECCCEEE SLPEQLFNYKDVSKNSNKITKLDDKFDVYFKVYSKNNFQKTNDLSTIKLNKIQDLYLYNF ECCHHHCCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHH LDKTSSEFESFLDLMTKKEKILARNNLKITTLYGSKNEQYSKDEPKTEIFLDFDDVKQFI HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHH YNKNLSKNLEEEAFHLSNLFVPSKNIDKPERFNKFILKSQKVNEIFLDEVFYSEIDKNSG HCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC KITLYSLNYKSIFPKTLKNIEKLNNKDLLMFEKIDFGDINIKNVELKTVNSLEEFNNIYK EEEEEEECCHHHCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEHHHHHHHHHHHH KIQG HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA