Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020467
Identifier: 54020467
GI number: 54020467
Start: 407894
End: 409366
Strand: Reverse
Name: 54020467
Synonym: mhp350
Alternate gene names: NA
Gene position: 409366-407894 (Counterclockwise)
Preceding gene: 54020468
Following gene: 54020466
Centisome position: 45.85
GC content: 24.64
Gene sequence:
>1473_bases ATGGATTTAAAAAAATATAAAAATTTTTTTCTAATAGGATTTATATTAACCAACTTAACCGCCGCTACCGTGGTTTCGCT TGGTTTGATTCTTAATATTTATAATAACTATAAAAATAATTTAAAAAATGAAACCCAATTTAAAATTAAGGATGATAATA ATAAATTTTTCAGTATCTCAGACTCTAAAAAAATAACTGATCTTAATAAACTTTTATGACTAAATAACCCATATTGATAT AACATTTTGACAAAACAACCCCAAAAAGCGGATTTATTAATTCAAAAATACCCCCTATTTGAAAACAATTTATTTGATAA TTCATTTAACAATAATGCTTTAAGAAAATTATCAAGTTTCTTTCGTTCTGAGAGCGCCAAAAACAAAGACACAATGGAAT TTAATCTTATTTGGGATCAAGGGCAATTAAAAGACAAGAAAATTGTAGACAATTTCGTTGTCTTAGATAATAAAAATGAT TTTGTATCTTTTTTTTCTAAATTAAAAATTGAAAAACTAAGTAAAAGAATTTTGTCAACACCTGACTTTTTTAAGAAAAA ATCAATTATTATTTATATACGTCCTCAAGATATTGCTGATGATTCATCATTTAATTCAAAATCAAAAATATCATCATTAA ACCCTAATCATATTTTCCAAAACAAACAAAATAATGGAAAAACAAGTATTATTTCTTTTGACTCAAAATTTGATAATTTT TTTCGTACAGGAGAAAAGTACAGAGAAACCGGTCCGCCGAAAGTAATTAACTACAATTTTGCTAGAGCTTCTCTGTTTTC AAATTCAACAACTACAAATTTCGATATTTTTTATAAAATTATAGATAAGTCAAACAAACATGTTTTTGATCATAGTCTAG ATATTCATATTAGTAATATTGAAGATCTTGTACTTTACAATAAAATTATTCGCCATAAAGAATCAAATGAATTTAAAAAA TTTCTTGTAAAAAAGCAAGAAATTTTTAAGAAAAACCCTTTTCAACTTACTCGTTTATATGCTATGCAGGGTTTAGATCT ATCAAAGCAAAGCACTGAAGAAAACCAAATTTTTTCTACATTAGATCAAACAAAAAAATTCATTAGTAATAATTCGCTAT TAAAAAGCTGGGATTGGGGCGAGGCTTTTCACCCTTCAAATTTGTTCATTAACAACGATAACAACTCTGAAGAATTTAAT AAATTCATACTTAAAAAACAAAATCCAAAAATTATTTTTGACGATCAGATTTTATATTGGCAGATAGAGAAAGATATAAT TAAAATTTATACCTTTAATTATAAGGATTTGTTTCCTAATTTTGCGGTTGAACCAGATAATTTTATAGTTAATGATCTTC AAAAATTTGAAAAAATAGATATTGGAAATACTGATATTAAAAAGCTAAAGTACATAAAAATCAAAACATTACAGGAATTT AACTCATTGCATAATCAAATAAGAACAGCTTAA
Upstream 100 bases:
>100_bases AAAATTGATTTTGGTGATATAAATATTAAAAATGTTGAGTTAAAAACAGTAAATTCACTCGAAGAGTTTAATAATATATA TAAAAAAATACAAGGCTAGT
Downstream 100 bases:
>100_bases TTTTAGTTTGCTATACAAAAAATAAAAAAAATGTAAAATAAGACAAAAATTTAATGACATTGTTATAAATTAATGCACTA ATTTTTATATTTTTTAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MDLKKYKNFFLIGFILTNLTAATVVSLGLILNIYNNYKNNLKNETQFKIKDDNNKFFSISDSKKITDLNKLLWLNNPYWY NILTKQPQKADLLIQKYPLFENNLFDNSFNNNALRKLSSFFRSESAKNKDTMEFNLIWDQGQLKDKKIVDNFVVLDNKND FVSFFSKLKIEKLSKRILSTPDFFKKKSIIIYIRPQDIADDSSFNSKSKISSLNPNHIFQNKQNNGKTSIISFDSKFDNF FRTGEKYRETGPPKVINYNFARASLFSNSTTTNFDIFYKIIDKSNKHVFDHSLDIHISNIEDLVLYNKIIRHKESNEFKK FLVKKQEIFKKNPFQLTRLYAMQGLDLSKQSTEENQIFSTLDQTKKFISNNSLLKSWDWGEAFHPSNLFINNDNNSEEFN KFILKKQNPKIIFDDQILYWQIEKDIIKIYTFNYKDLFPNFAVEPDNFIVNDLQKFEKIDIGNTDIKKLKYIKIKTLQEF NSLHNQIRTA
Sequences:
>Translated_490_residues MDLKKYKNFFLIGFILTNLTAATVVSLGLILNIYNNYKNNLKNETQFKIKDDNNKFFSISDSKKITDLNKLL*LNNPY*Y NILTKQPQKADLLIQKYPLFENNLFDNSFNNNALRKLSSFFRSESAKNKDTMEFNLIWDQGQLKDKKIVDNFVVLDNKND FVSFFSKLKIEKLSKRILSTPDFFKKKSIIIYIRPQDIADDSSFNSKSKISSLNPNHIFQNKQNNGKTSIISFDSKFDNF FRTGEKYRETGPPKVINYNFARASLFSNSTTTNFDIFYKIIDKSNKHVFDHSLDIHISNIEDLVLYNKIIRHKESNEFKK FLVKKQEIFKKNPFQLTRLYAMQGLDLSKQSTEENQIFSTLDQTKKFISNNSLLKSWDWGEAFHPSNLFINNDNNSEEFN KFILKKQNPKIIFDDQILYWQIEKDIIKIYTFNYKDLFPNFAVEPDNFIVNDLQKFEKIDIGNTDIKKLKYIKIKTLQEF NSLHNQIRTA >Mature_490_residues MDLKKYKNFFLIGFILTNLTAATVVSLGLILNIYNNYKNNLKNETQFKIKDDNNKFFSISDSKKITDLNKLL*LNNPY*Y NILTKQPQKADLLIQKYPLFENNLFDNSFNNNALRKLSSFFRSESAKNKDTMEFNLIWDQGQLKDKKIVDNFVVLDNKND FVSFFSKLKIEKLSKRILSTPDFFKKKSIIIYIRPQDIADDSSFNSKSKISSLNPNHIFQNKQNNGKTSIISFDSKFDNF FRTGEKYRETGPPKVINYNFARASLFSNSTTTNFDIFYKIIDKSNKHVFDHSLDIHISNIEDLVLYNKIIRHKESNEFKK FLVKKQEIFKKNPFQLTRLYAMQGLDLSKQSTEENQIFSTLDQTKKFISNNSLLKSWDWGEAFHPSNLFINNDNNSEEFN KFILKKQNPKIIFDDQILYWQIEKDIIKIYTFNYKDLFPNFAVEPDNFIVNDLQKFEKIDIGNTDIKKLKYIKIKTLQEF NSLHNQIRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57563; Mature: 57563
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKKYKNFFLIGFILTNLTAATVVSLGLILNIYNNYKNNLKNETQFKIKDDNNKFFSIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEC DSKKITDLNKLLLNNPYYNILTKQPQKADLLIQKYPLFENNLFDNSFNNNALRKLSSFFR CCCHHHHHHHHHHCCCCEEEECCCCCHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH SESAKNKDTMEFNLIWDQGQLKDKKIVDNFVVLDNKNDFVSFFSKLKIEKLSKRILSTPD HCCCCCCCCEEEEEEECCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC FFKKKSIIIYIRPQDIADDSSFNSKSKISSLNPNHIFQNKQNNGKTSIISFDSKFDNFFR HHCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCHHCCCCCCCCCEEEEEECHHHHHHHH TGEKYRETGPPKVINYNFARASLFSNSTTTNFDIFYKIIDKSNKHVFDHSLDIHISNIED CCHHHHHCCCCCEEEECCHHHHHCCCCCCCCCEEEEEEECCCCCEEECCEEEEEECCHHH LVLYNKIIRHKESNEFKKFLVKKQEIFKKNPFQLTRLYAMQGLDLSKQSTEENQIFSTLD HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH QTKKFISNNSLLKSWDWGEAFHPSNLFINNDNNSEEFNKFILKKQNPKIIFDDQILYWQI HHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEECCCEEEEEE EKDIIKIYTFNYKDLFPNFAVEPDNFIVNDLQKFEKIDIGNTDIKKLKYIKIKTLQEFNS ECCEEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEHHHHHHHHH LHNQIRTA HHHHHCCC >Mature Secondary Structure MDLKKYKNFFLIGFILTNLTAATVVSLGLILNIYNNYKNNLKNETQFKIKDDNNKFFSIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEC DSKKITDLNKLLLNNPYYNILTKQPQKADLLIQKYPLFENNLFDNSFNNNALRKLSSFFR CCCHHHHHHHHHHCCCCEEEECCCCCHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHH SESAKNKDTMEFNLIWDQGQLKDKKIVDNFVVLDNKNDFVSFFSKLKIEKLSKRILSTPD HCCCCCCCCEEEEEEECCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC FFKKKSIIIYIRPQDIADDSSFNSKSKISSLNPNHIFQNKQNNGKTSIISFDSKFDNFFR HHCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCHHCCCCCCCCCEEEEEECHHHHHHHH TGEKYRETGPPKVINYNFARASLFSNSTTTNFDIFYKIIDKSNKHVFDHSLDIHISNIED CCHHHHHCCCCCEEEECCHHHHHCCCCCCCCCEEEEEEECCCCCEEECCEEEEEECCHHH LVLYNKIIRHKESNEFKKFLVKKQEIFKKNPFQLTRLYAMQGLDLSKQSTEENQIFSTLD HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH QTKKFISNNSLLKSWDWGEAFHPSNLFINNDNNSEEFNKFILKKQNPKIIFDDQILYWQI HHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEECCCEEEEEE EKDIIKIYTFNYKDLFPNFAVEPDNFIVNDLQKFEKIDIGNTDIKKLKYIKIKTLQEFNS ECCEEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEHHHHHHHHH LHNQIRTA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA