Click here to switch to the map view.

The map label for this gene is 54020396

Identifier: 54020396

GI number: 54020396

Start: 247361

End: 247822

Strand: Reverse

Name: 54020396

Synonym: mhp219

Alternate gene names: NA

Gene position: 247822-247361 (Counterclockwise)

Preceding gene: 54020397

Following gene: 54020395

Centisome position: 27.76

GC content: 19.26

Gene sequence:

>462_bases
ATGAAATCAAAAATCTTTTTAGAAATTAAAAATAAGTCCGAAATTAAGCGTTTTATTAAAAATGAAATGAAATTTAGAAA
TTATCGTCGAATTTTAGGTAAAAAATTCAAATTTTTATTTTATAATTTATCAAAAATTCTTGAAGTTGAAATTTCAAATT
ATAAATCTGCGATTCTTGATCTAGAACTAATTAAAAATATTAATAAAATTAATAATTGGATTTTTTGTATGAGTAAATTT
TTAAATGAAAATTTAATTATAAATTTTCGTATTTATAAAAATTTAGCAATTTTTTTATATTATAGTTGAAAAATACACCT
TAAAAAATTTAAACTGCATACAAAATTAACAAATTACGAAGACAAACGCCGGGACGCTTTTAATGCTTTATCAATTGAAT
GAATTAAAGTTGATTCGGTGTTTAATCTTAAAATTATTGCGATTTTAAAGAGGTGAAAATAA

Upstream 100 bases:

>100_bases
GTTTTTAATGAGGCAGTTGAGATAACTAAAATTTTTAGCATTGCTGGTGACAATGAATTTTGCTTTGTAAATGCTGTTTT
ACAAAAAATATACAATTATT

Downstream 100 bases:

>100_bases
ATGACCCTACTCGAAAAGGTTTTAAAAATGGGCTTTGAAAAGGCAGAATCACTAATTCGTACAGGTTATGTAAAGCTCAA
TAATCAAACTTGTTATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKSKIFLEIKNKSEIKRFIKNEMKFRNYRRILGKKFKFLFYNLSKILEVEISNYKSAILDLELIKNINKINNWIFCMSKF
LNENLIINFRIYKNLAIFLYYSWKIHLKKFKLHTKLTNYEDKRRDAFNALSIEWIKVDSVFNLKIIAILKRWK

Sequences:

>Translated_153_residues
MKSKIFLEIKNKSEIKRFIKNEMKFRNYRRILGKKFKFLFYNLSKILEVEISNYKSAILDLELIKNINKINNWIFCMSKF
LNENLIINFRIYKNLAIFLYYS*KIHLKKFKLHTKLTNYEDKRRDAFNALSIE*IKVDSVFNLKIIAILKR*K
>Mature_153_residues
MKSKIFLEIKNKSEIKRFIKNEMKFRNYRRILGKKFKFLFYNLSKILEVEISNYKSAILDLELIKNINKINNWIFCMSKF
LNENLIINFRIYKNLAIFLYYS*KIHLKKFKLHTKLTNYEDKRRDAFNALSIE*IKVDSVFNLKIIAILKR*K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18229; Mature: 18229

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKIFLEIKNKSEIKRFIKNEMKFRNYRRILGKKFKFLFYNLSKILEVEISNYKSAILD
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHH
LELIKNINKINNWIFCMSKFLNENLIINFRIYKNLAIFLYYSKIHLKKFKLHTKLTNYED
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCEEEEEEEEHHHHHHHEEHHHHCCCCH
KRRDAFNALSIEIKVDSVFNLKIIAILKRK
HHHHCCCEEEEEEEECCEECEEEEEEEECC
>Mature Secondary Structure
MKSKIFLEIKNKSEIKRFIKNEMKFRNYRRILGKKFKFLFYNLSKILEVEISNYKSAILD
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCHHHHHHH
LELIKNINKINNWIFCMSKFLNENLIINFRIYKNLAIFLYYSKIHLKKFKLHTKLTNYED
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCEEEEEEEEHHHHHHHEEHHHHCCCCH
KRRDAFNALSIEIKVDSVFNLKIIAILKRK
HHHHCCCEEEEEEEECCEECEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA