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The map label for this gene is 54020393

Identifier: 54020393

GI number: 54020393

Start: 245088

End: 245516

Strand: Reverse

Name: 54020393

Synonym: mhp216

Alternate gene names: NA

Gene position: 245516-245088 (Counterclockwise)

Preceding gene: 54020394

Following gene: 54020392

Centisome position: 27.5

GC content: 23.54

Gene sequence:

>429_bases
TTGTATAAGGATTTTAGCAAAAGGCGTGATATTATTTTAAGTTCAAATAAAAAATTTAATGAAAAAAAACGAATTTGTCT
AACAAAAAATAGTCAAATAAATGAAAATTGTGATGATAGGGCAAGTCTTGATTTAGAAATTTTTGAGAAAAAAATTGAAA
AAATTCAATTTTGCGCTTCAGGATGCAGCCTTTTGATTGCAAGTTGTTATTTATTTGAGAAAATTCTAATTAAAAAAACT
ATAAATCAAGTCAAAATTTTACTAGATAAATATGAAAAAATGATAAATTTTCAGAAAATTATTCCTGAATTACACGGTCT
TAATGCTTTAGTTATGGTAAAAAATCACCCAAATCGCCTAGTATGTGTGAATATACCAGTAAAATTATTAAAAAATCAAC
TAGGAAATTATGAAAAAAATCAGAATTAA

Upstream 100 bases:

>100_bases
AAGAAAAGAAGCTTTATTCGTGTTTCACTAGCATTTTACAATGATTTTAATGATATTGATAGACTAATTTCGGTTTTAGA
AAAAAAGGAGTTTTTGAATT

Downstream 100 bases:

>100_bases
CAAATTTTTATCGGAAATGGGGGTTTGCTCGCGTAGGCAATCTGAGAAATTAATTTTACAGGGTCGGATAAAAATAAATA
ACGAAACTGCGAAAATTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MYKDFSKRRDIILSSNKKFNEKKRICLTKNSQINENCDDRASLDLEIFEKKIEKIQFCASGCSLLIASCYLFEKILIKKT
INQVKILLDKYEKMINFQKIIPELHGLNALVMVKNHPNRLVCVNIPVKLLKNQLGNYEKNQN

Sequences:

>Translated_142_residues
MYKDFSKRRDIILSSNKKFNEKKRICLTKNSQINENCDDRASLDLEIFEKKIEKIQFCASGCSLLIASCYLFEKILIKKT
INQVKILLDKYEKMINFQKIIPELHGLNALVMVKNHPNRLVCVNIPVKLLKNQLGNYEKNQN
>Mature_142_residues
MYKDFSKRRDIILSSNKKFNEKKRICLTKNSQINENCDDRASLDLEIFEKKIEKIQFCASGCSLLIASCYLFEKILIKKT
INQVKILLDKYEKMINFQKIIPELHGLNALVMVKNHPNRLVCVNIPVKLLKNQLGNYEKNQN

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16621; Mature: 16621

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKDFSKRRDIILSSNKKFNEKKRICLTKNSQINENCDDRASLDLEIFEKKIEKIQFCAS
CCCCHHHHCCEEEECCCCCCCCCCEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHH
GCSLLIASCYLFEKILIKKTINQVKILLDKYEKMINFQKIIPELHGLNALVMVKNHPNRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
VCVNIPVKLLKNQLGNYEKNQN
EEECCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYKDFSKRRDIILSSNKKFNEKKRICLTKNSQINENCDDRASLDLEIFEKKIEKIQFCAS
CCCCHHHHCCEEEECCCCCCCCCCEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHH
GCSLLIASCYLFEKILIKKTINQVKILLDKYEKMINFQKIIPELHGLNALVMVKNHPNRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
VCVNIPVKLLKNQLGNYEKNQN
EEECCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA